Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-961P-201ENST00000363893 105 ntBASIC1.73□□□□□ -2.13
VTNP04004 RNU6-1227P-201ENST00000383981 107 ntBASIC1.73□□□□□ -2.13
VTNP04004 RNU6-1235P-201ENST00000384559 107 ntBASIC1.73□□□□□ -2.13
VTNP04004 SNORA8-201ENST00000384574 139 ntBASIC1.73□□□□□ -2.13
VTNP04004 RNA5SP212-201ENST00000391223 107 ntBASIC1.73□□□□□ -2.13
VTNP04004 MRPL42P3-201ENST00000401492 326 ntBASIC1.73□□□□□ -2.13
VTNP04004 MIR1185-2-201ENST00000408687 86 ntBASIC1.73□□□□□ -2.13
VTNP04004 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
VTNP04004 AC244636.1-201ENST00000421152 228 ntBASIC1.73□□□□□ -2.13
VTNP04004 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.73□□□□□ -2.13
VTNP04004 RNU7-95P-201ENST00000459222 64 ntBASIC1.73□□□□□ -2.13
VTNP04004 RNU6-498P-201ENST00000459468 107 ntBASIC1.73□□□□□ -2.13
VTNP04004 AC074133.1-201ENST00000515696 183 ntBASIC1.73□□□□□ -2.13
VTNP04004 AC015720.1-201ENST00000565251 277 ntBASIC1.73□□□□□ -2.13
VTNP04004 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
VTNP04004 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
VTNP04004 AC040896.1-201ENST00000613819 479 ntBASIC1.73□□□□□ -2.13
VTNP04004 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.73□□□□□ -2.13
VTNP04004 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.73□□□□□ -2.13
VTNP04004 AC022513.1-201ENST00000624512 117 ntBASIC1.73□□□□□ -2.13
VTNP04004 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VTNP04004 AL359851.1-201ENST00000569460 4997 ntBASIC1.72□□□□□ -2.13
VTNP04004 RNU6-626P-201ENST00000363354 107 ntBASIC1.72□□□□□ -2.13
VTNP04004 Y_RNA.164-201ENST00000363709 102 ntBASIC1.72□□□□□ -2.13
VTNP04004 SNORA72.2-201ENST00000365028 127 ntBASIC1.72□□□□□ -2.13
VTNP04004 Y_RNA.471-201ENST00000384312 102 ntBASIC1.72□□□□□ -2.13
VTNP04004 RNU6-101P-201ENST00000410323 104 ntBASIC1.72□□□□□ -2.13
VTNP04004 RAB28P5-201ENST00000427490 651 ntBASIC1.72□□□□□ -2.13
VTNP04004 HMGN2P34-201ENST00000437647 269 ntBASIC1.72□□□□□ -2.13
VTNP04004 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.72□□□□□ -2.13
VTNP04004 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.72□□□□□ -2.13
VTNP04004 RNU1-131P-201ENST00000458943 161 ntBASIC1.72□□□□□ -2.13
VTNP04004 AC011406.1-201ENST00000512440 370 ntBASIC1.72□□□□□ -2.13
VTNP04004 RNU6-1053P-201ENST00000515930 101 ntBASIC1.72□□□□□ -2.13
VTNP04004 RNU2-34P-201ENST00000516534 121 ntBASIC1.72□□□□□ -2.13
VTNP04004 RNU6-1012P-201ENST00000516606 109 ntBASIC1.72□□□□□ -2.13
VTNP04004 SUMO2P18-201ENST00000518873 252 ntBASIC1.72□□□□□ -2.13
VTNP04004 DNAJC19P9-201ENST00000555084 351 ntBASIC1.72□□□□□ -2.13
VTNP04004 AL390123.1-201ENST00000603216 237 ntBASIC1.72□□□□□ -2.13
VTNP04004 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.72□□□□□ -2.13
VTNP04004 MIR3674-201ENST00000636576 68 ntBASIC1.72□□□□□ -2.13
VTNP04004 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
VTNP04004 Y_RNA.4-201ENST00000362333 112 ntBASIC1.71□□□□□ -2.14
VTNP04004 RNU6-1266P-201ENST00000362794 105 ntBASIC1.71□□□□□ -2.14
VTNP04004 RNU6-862P-201ENST00000362804 105 ntBASIC1.71□□□□□ -2.14
VTNP04004 RNU6-1240P-201ENST00000365155 104 ntBASIC1.71□□□□□ -2.14
VTNP04004 RNU6-1264P-201ENST00000383891 107 ntBASIC1.71□□□□□ -2.14
VTNP04004 RNU6-20P-201ENST00000384106 107 ntBASIC1.71□□□□□ -2.14
VTNP04004 Y_RNA.526-201ENST00000384572 110 ntBASIC1.71□□□□□ -2.14
VTNP04004 Y_RNA.527-201ENST00000384573 102 ntBASIC1.71□□□□□ -2.14
VTNP04004 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.71□□□□□ -2.14
VTNP04004 Y_RNA.645-201ENST00000391229 102 ntBASIC1.71□□□□□ -2.14
VTNP04004 ATP5J2P3-201ENST00000451550 258 ntBASIC1.71□□□□□ -2.14
VTNP04004 NDUFB4P10-201ENST00000452541 359 ntBASIC1.71□□□□□ -2.14
VTNP04004 AC112492.4-201ENST00000456549 352 ntBASIC1.71□□□□□ -2.14
VTNP04004 RNA5SP57-201ENST00000459463 123 ntBASIC1.71□□□□□ -2.14
VTNP04004 RNU6-221P-201ENST00000459541 99 ntBASIC1.71□□□□□ -2.14
VTNP04004 RNU6-856P-201ENST00000516959 98 ntBASIC1.71□□□□□ -2.14
VTNP04004 AC025647.1-201ENST00000517879 253 ntBASIC1.71□□□□□ -2.14
VTNP04004 AP003072.1-201ENST00000531740 145 ntBASIC1.71□□□□□ -2.14
VTNP04004 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.71□□□□□ -2.14
VTNP04004 AC104695.3-201ENST00000604052 296 ntBASIC1.71□□□□□ -2.14
VTNP04004 AL512598.1-201ENST00000610158 273 ntBASIC1.71□□□□□ -2.14
VTNP04004 AC004467.1-201ENST00000615678 330 ntBASIC1.71□□□□□ -2.14
VTNP04004 AC091932.3-201ENST00000624223 323 ntBASIC1.71□□□□□ -2.14
VTNP04004 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VTNP04004 SNORA63-201ENST00000363450 132 ntBASIC1.7□□□□□ -2.14
VTNP04004 RNU4-50P-201ENST00000364361 141 ntBASIC1.7□□□□□ -2.14
VTNP04004 RNU6-1310P-201ENST00000384153 107 ntBASIC1.7□□□□□ -2.14
VTNP04004 RNU6-417P-201ENST00000384712 107 ntBASIC1.7□□□□□ -2.14
VTNP04004 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
VTNP04004 MIR676-201ENST00000390702 67 ntBASIC1.7□□□□□ -2.14
VTNP04004 SNORA67.6-201ENST00000391093 99 ntBASIC1.7□□□□□ -2.14
VTNP04004 AC008134.1-201ENST00000420943 193 ntBASIC1.7□□□□□ -2.14
VTNP04004 SDAD1P3-201ENST00000427380 333 ntBASIC1.7□□□□□ -2.14
VTNP04004 TOMM22P2-201ENST00000430735 237 ntBASIC1.7□□□□□ -2.14
VTNP04004 MTCYBP6-201ENST00000441810 138 ntBASIC1.7□□□□□ -2.14
VTNP04004 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.7□□□□□ -2.14
VTNP04004 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.7□□□□□ -2.14
VTNP04004 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.7□□□□□ -2.14
VTNP04004 RNU6-397P-201ENST00000516226 104 ntBASIC1.7□□□□□ -2.14
VTNP04004 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.7□□□□□ -2.14
VTNP04004 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.7□□□□□ -2.14
VTNP04004 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.7□□□□□ -2.14
VTNP04004 AC005176.2-201ENST00000596933 147 ntBASIC1.7□□□□□ -2.14
VTNP04004 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.7□□□□□ -2.14
VTNP04004 Y_RNA.772-201ENST00000606692 102 ntBASIC1.7□□□□□ -2.14
VTNP04004 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VTNP04004 RNU4-13P-201ENST00000364019 141 ntBASIC1.69□□□□□ -2.14
VTNP04004 Y_RNA.439-201ENST00000384119 94 ntBASIC1.69□□□□□ -2.14
VTNP04004 Y_RNA.458-201ENST00000384240 102 ntBASIC1.69□□□□□ -2.14
VTNP04004 SNORA48.1-201ENST00000390879 135 ntBASIC1.69□□□□□ -2.14
VTNP04004 U8.20-201ENST00000459445 131 ntBASIC1.69□□□□□ -2.14
VTNP04004 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VTNP04004 RNU6-475P-201ENST00000516073 104 ntBASIC1.69□□□□□ -2.14
VTNP04004 RNVU1-2-201ENST00000516326 135 ntBASIC1.69□□□□□ -2.14
VTNP04004 Y_RNA.676-201ENST00000516393 96 ntBASIC1.69□□□□□ -2.14
VTNP04004 AP002001.1-203ENST00000534002 267 ntBASIC1.69□□□□□ -2.14
VTNP04004 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.69□□□□□ -2.14
VTNP04004 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms