Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 MIR5694-201ENST00000581190 76 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 MIR6845-201ENST00000613182 61 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 MIR340-201ENST00000362125 95 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 MIR568-201ENST00000385036 95 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 SNORA40.19-201ENST00000390846 128 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 SUMO1P2-201ENST00000452524 304 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 RNU1-131P-201ENST00000458943 161 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 RNU6-496P-201ENST00000516145 99 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 MIR4781-201ENST00000585250 76 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 SNORD14A-201ENST00000606526 91 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 AC245884.12-201ENST00000615364 59 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 AC245060.5-201ENST00000610778 3293 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 AL159152.1-201ENST00000635019 2587 ntBASIC2.43□□□□□ -2.02
TRIM43BA6NCK2 MIR21-201ENST00000362134 72 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 RNU6-23P-201ENST00000363283 107 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 RNU6-324P-201ENST00000363957 106 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 RNU6-1240P-201ENST00000365155 104 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 MIR1253-201ENST00000408273 105 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 POLR2KP2-201ENST00000438155 177 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 TRBVB-201ENST00000477100 408 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 HMGB3P17-201ENST00000504195 649 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 AC009127.3-201ENST00000570531 403 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 AC008749.1-201ENST00000597650 306 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 MIR6840-201ENST00000611937 71 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 AL590240.4-201ENST00000616908 390 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 U4.1-201ENST00000620349 87 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 U6.115-201ENST00000636045 103 ntBASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM43BA6NCK2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 Y_RNA.84-201ENST00000363011 104 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 snoU2_19.2-201ENST00000363024 80 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 Y_RNA.286-201ENST00000364813 102 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 RNU6-290P-201ENST00000365212 101 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 Y_RNA.376-201ENST00000365638 108 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 RNU6-102P-201ENST00000384485 104 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 MIR215-201ENST00000384858 110 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 RNU2-2P-201ENST00000410396 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 AL445646.1-201ENST00000431784 216 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 HMGB3P3-201ENST00000510526 400 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 AC037487.3-201ENST00000606668 112 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.15-201ENST00000611544 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.16-201ENST00000613119 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.12-201ENST00000613778 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.20-201ENST00000613956 192 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.9-201ENST00000615427 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.11-201ENST00000616345 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.2-201ENST00000616535 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.3-201ENST00000617785 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.19-201ENST00000618602 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 RNU2-1-201ENST00000618664 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.6-201ENST00000619225 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.5-201ENST00000619465 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 U2.10-201ENST00000620268 191 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 MIR6766-201ENST00000622641 72 ntBASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM43BA6NCK2 SNORD81.1-201ENST00000363064 77 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 SNORD114-6-201ENST00000364393 72 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.243-201ENST00000364481 109 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 SNORA53-201ENST00000391141 249 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 U3.40-201ENST00000408706 208 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 AC108667.1-201ENST00000428618 249 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 RPL23AP3-201ENST00000453844 468 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 HSPE1P25-201ENST00000455484 251 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 RNU6-1146P-201ENST00000516282 102 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 MIR4503-201ENST00000582187 83 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 SDR42E1P4-201ENST00000620894 481 ntBASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM43BA6NCK2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 RNU1-58P-201ENST00000362413 163 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 RNU6-271P-201ENST00000363858 105 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 RNA5SP493-201ENST00000364115 91 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 SNORD115-30-201ENST00000364117 82 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 RNU6-1164P-201ENST00000364428 107 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.288-201ENST00000364854 92 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms