Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 MIR1253-201ENST00000408273 105 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 COX6CP10-201ENST00000416832 224 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 AL353689.1-201ENST00000438895 199 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 RPS27P22-201ENST00000478056 241 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 HMGB3P3-201ENST00000510526 400 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 AC100767.1-201ENST00000528178 123 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 MIR4308-201ENST00000580634 81 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 AC005972.2-201ENST00000604690 348 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 AC134026.1-201ENST00000623249 2239 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-117P-201ENST00000365415 107 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-493P-201ENST00000391321 108 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 HSPE1P21-201ENST00000438283 308 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 AC245102.2-201ENST00000448956 180 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 RNU7-115P-201ENST00000516433 55 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 RNU7-116P-201ENST00000516940 62 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 AC004832.4-201ENST00000608952 331 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 MIR8057-201ENST00000620957 69 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 MIR3651-201ENST00000630427 90 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 U6.106-201ENST00000636360 105 ntBASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
PCDHA9Q9Y5H5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 AL356292.1-201ENST00000283110 373 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 MIR208A-201ENST00000362287 71 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-1205P-201ENST00000363625 106 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 SNORD56.5-201ENST00000364281 72 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 RNU4-17P-201ENST00000365598 141 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 SNORD116-13-201ENST00000384408 92 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-160P-201ENST00000384591 107 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 SNORA8.3-201ENST00000384679 139 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 MIR181A2-201ENST00000384863 110 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 AC011406.1-201ENST00000512440 370 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-861P-201ENST00000516745 106 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 CYCSP26-201ENST00000534107 320 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 AC026271.5-201ENST00000577873 130 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 MIR4438-201ENST00000585271 93 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 AP003357.1-201ENST00000604497 148 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 U6.73-201ENST00000619194 103 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 AC068647.2-201ENST00000637380 353 ntBASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHA9Q9Y5H5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 MIR422A-201ENST00000362286 90 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 Y_RNA.7-201ENST00000362352 102 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 Y_RNA.121-201ENST00000363309 113 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 RNU1-22P-201ENST00000363334 158 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 Y_RNA.293-201ENST00000364908 93 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 U8.7-201ENST00000364940 136 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 U8.9-201ENST00000365667 134 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 Y_RNA.464-201ENST00000384282 110 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 MIR626-201ENST00000385032 94 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 MIR526A2-201ENST00000390198 65 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 PCNPP3-201ENST00000393579 471 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 MIR1262-201ENST00000408276 93 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 AC010409.1-201ENST00000487382 476 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-1278P-201ENST00000516130 107 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 MIR5195-201ENST00000583555 115 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 AL353149.1-201ENST00000610667 244 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 Y_RNA.802-201ENST00000614892 130 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 MIR548AY-201ENST00000617669 107 ntBASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHA9Q9Y5H5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 snoU2-30.2-201ENST00000362805 70 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 RNU1-96P-201ENST00000364163 162 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 SNORD114-6-201ENST00000364393 72 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 Y_RNA.240-201ENST00000364469 95 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 RNU6-443P-201ENST00000384780 107 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 AL135786.1-201ENST00000415892 214 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 AL162725.1-201ENST00000435405 301 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 RNU7-26P-201ENST00000458980 63 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 RN7SL297P-201ENST00000483161 293 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 RN7SL636P-201ENST00000497504 294 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 AC097462.1-201ENST00000514125 324 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 Y_RNA.662-201ENST00000516028 97 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 RN7SKP57-201ENST00000517248 293 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 AC022559.1-201ENST00000520905 205 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 AC021269.2-201ENST00000532318 330 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 AC093732.2-201ENST00000607950 274 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 AC091953.5-201ENST00000622919 233 ntBASIC2.77□□□□□ -1.97
PCDHA9Q9Y5H5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms