Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU6-740P-201ENST00000364734 105 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.306-201ENST00000365015 102 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.312-201ENST00000365089 102 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.322-201ENST00000365151 102 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 MIR586-201ENST00000385035 97 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 RNU6-220P-201ENST00000390919 107 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 RPL30P4-201ENST00000429309 333 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 MRPS10P1-201ENST00000448483 130 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 RPL23AP3-201ENST00000453844 468 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.650-201ENST00000459002 102 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 AC080013.2-201ENST00000460866 323 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 RNU6-182P-201ENST00000516970 105 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.777-201ENST00000516982 102 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 AC121758.2-201ENST00000553271 193 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.6□□□□□ -1.99
DKK3Q9UBP4 SNORD53-201ENST00000579969 78 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.771-201ENST00000598668 102 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 AC006380.1-201ENST00000603598 186 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 AC098479.1-201ENST00000609225 154 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 AC245884.12-201ENST00000615364 59 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.789-201ENST00000622480 102 ntBASIC2.6□□□□□ -1.99
DKK3Q9UBP4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
DKK3Q9UBP4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
DKK3Q9UBP4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.59□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.29-201ENST00000362570 113 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.76-201ENST00000362931 109 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 RNU6-454P-201ENST00000364292 107 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 SNORD87-201ENST00000364849 89 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 MIR218-1-201ENST00000384999 110 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 MIR27B-201ENST00000385129 97 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 MIR1294-201ENST00000408503 142 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 MIR1298-201ENST00000408783 112 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 AC140059.1-201ENST00000489238 361 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 RNU6-155P-201ENST00000516347 100 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 SNORA81.3-201ENST00000517283 198 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.59□□□□□ -1.99
DKK3Q9UBP4 MIR3199-1-201ENST00000582434 88 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.59□□□□□ -1.99
DKK3Q9UBP4 AL109918.3-201ENST00000603072 338 ntBASIC2.59□□□□□ -1.99
DKK3Q9UBP4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.59□□□□□ -2
DKK3Q9UBP4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.59□□□□□ -2
DKK3Q9UBP4 Y_RNA.274-201ENST00000364714 101 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 SNORA6-201ENST00000384033 151 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 RNU6-1248P-201ENST00000391096 64 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 MIR300-201ENST00000401138 83 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 AL138752.1-201ENST00000452964 351 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.58□□□□□ -2
DKK3Q9UBP4 RNU6-107P-201ENST00000516643 102 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 RNU6-1098P-201ENST00000516772 96 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 RNU1-117P-201ENST00000517041 158 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 RNU6-586P-201ENST00000517265 104 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.58□□□□□ -2
DKK3Q9UBP4 SNORD14A-201ENST00000606526 91 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.58□□□□□ -2
DKK3Q9UBP4 AC069294.1-201ENST00000608397 350 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 AC090517.3-201ENST00000625170 141 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 MIR203B-201ENST00000636080 86 ntBASIC2.58□□□□□ -2
DKK3Q9UBP4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.58□□□□□ -2
DKK3Q9UBP4 Y_RNA.83-201ENST00000363005 113 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 Y_RNA.217-201ENST00000364214 105 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 Y_RNA.243-201ENST00000364481 109 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 Y_RNA.297-201ENST00000364950 91 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 RNY4P28-201ENST00000365281 93 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 U3.40-201ENST00000408706 208 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 RNU2-61P-201ENST00000411069 191 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.57□□□□□ -2
DKK3Q9UBP4 AL603825.1-201ENST00000438481 80 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 SNORD2.1-201ENST00000458762 69 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 Y_RNA.641-201ENST00000459414 105 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 RNU6-436P-201ENST00000516171 114 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 RNU6-191P-201ENST00000516295 94 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 RNA5SP148-201ENST00000516527 94 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 RNU6-548P-201ENST00000517083 115 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 RPL21P9-201ENST00000556149 474 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 AC105245.1-201ENST00000581934 244 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 MIR5092-201ENST00000583139 88 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 AL512605.2-201ENST00000592972 256 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
DKK3Q9UBP4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
DKK3Q9UBP4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
DKK3Q9UBP4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
DKK3Q9UBP4 Y_RNA.117-201ENST00000363294 101 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 Y_RNA.199-201ENST00000364014 102 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 RNU6-944P-201ENST00000364023 107 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 MIR95-201ENST00000385072 81 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 MIR548B-201ENST00000385247 97 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.56□□□□□ -2
DKK3Q9UBP4 MTND5P15-201ENST00000434246 349 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.56□□□□□ -2
DKK3Q9UBP4 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 RNU5F-4P-201ENST00000516581 114 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 IGKV3-31-201ENST00000523109 329 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 AC015712.3-201ENST00000559380 164 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 AC009127.3-201ENST00000570531 403 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 MIR3684-201ENST00000579779 74 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 AC011921.3-201ENST00000605540 361 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.56□□□□□ -2
DKK3Q9UBP4 AC012640.5-201ENST00000623897 319 ntBASIC2.56□□□□□ -2
DKK3Q9UBP4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms