Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SNORD115-3-201ENST00000363100 82 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 SNORD113-8-201ENST00000363497 74 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 RNU6-1240P-201ENST00000365155 104 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 Y_RNA.331-201ENST00000365267 102 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 RNU6-196P-201ENST00000384315 107 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 MIR568-201ENST00000385036 95 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.43□□□□□ -2.02
COL20A1Q9P218 AC096920.1-201ENST00000423991 241 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 IPO7P1-201ENST00000442031 636 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 AC025647.1-201ENST00000517879 253 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.43□□□□□ -2.02
COL20A1Q9P218 AP003733.2-201ENST00000529409 171 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 AP002001.1-203ENST00000534002 267 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 AC022202.1-201ENST00000613515 211 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 7SK.10-201ENST00000621414 298 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 AC006001.4-201ENST00000622243 395 ntBASIC2.43□□□□□ -2.02
COL20A1Q9P218 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.43□□□□□ -2.02
COL20A1Q9P218 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL20A1Q9P218 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
COL20A1Q9P218 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL20A1Q9P218 AL159152.1-201ENST00000635019 2587 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL20A1Q9P218 MIR340-201ENST00000362125 95 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 RNU4-90P-201ENST00000362773 141 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 Y_RNA.64-201ENST00000362845 102 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 RNU6-454P-201ENST00000364292 107 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 Y_RNA.446-201ENST00000384178 104 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 MIR764-201ENST00000390811 85 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 MIR1253-201ENST00000408273 105 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 AL139156.1-201ENST00000412785 841 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.42□□□□□ -2.02
COL20A1Q9P218 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.42□□□□□ -2.02
COL20A1Q9P218 RNU6-155P-201ENST00000516347 100 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 RNA5SP402-201ENST00000517148 110 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 RNU2-12P-201ENST00000517216 168 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.42□□□□□ -2.02
COL20A1Q9P218 MYL12BP1-201ENST00000569826 507 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 SNORD14A-201ENST00000606526 91 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.42□□□□□ -2.02
COL20A1Q9P218 MIR8062-201ENST00000621515 85 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 MIR7843-201ENST00000622274 79 ntBASIC2.42□□□□□ -2.02
COL20A1Q9P218 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL20A1Q9P218 RNA5SP432-201ENST00000362480 116 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 Y_RNA.101-201ENST00000363154 102 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 RNU6-23P-201ENST00000363283 107 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 RNU6-1164P-201ENST00000364428 107 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 MIR524-201ENST00000385242 87 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 RNU6-121P-201ENST00000410525 99 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 AL353689.1-201ENST00000438895 199 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.41□□□□□ -2.02
COL20A1Q9P218 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL20A1Q9P218 AC010598.1-201ENST00000510378 103 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 RNU1-104P-201ENST00000517280 175 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 AL161670.1-201ENST00000554348 137 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 AC055872.1-201ENST00000570978 278 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 U4.1-201ENST00000620349 87 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 AC006435.5-201ENST00000624486 112 ntBASIC2.41□□□□□ -2.02
COL20A1Q9P218 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.41□□□□□ -2.02
COL20A1Q9P218 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.02
COL20A1Q9P218 RNU1-58P-201ENST00000362413 163 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 Y_RNA.105-201ENST00000363182 111 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 Y_RNA.243-201ENST00000364481 109 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 Y_RNA.581-201ENST00000391017 97 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 AL445646.1-201ENST00000431784 216 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
COL20A1Q9P218 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.4□□□□□ -2.03
COL20A1Q9P218 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 SUMO2P18-201ENST00000518873 252 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.4□□□□□ -2.03
COL20A1Q9P218 MIR4446-201ENST00000578505 67 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 MIR5002-201ENST00000584713 97 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 AL590240.4-201ENST00000616908 390 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 MIR6132-201ENST00000622083 109 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 U6.115-201ENST00000636045 103 ntBASIC2.4□□□□□ -2.03
COL20A1Q9P218 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
COL20A1Q9P218 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
COL20A1Q9P218 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
COL20A1Q9P218 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL20A1Q9P218 SNORD114-7-201ENST00000362520 77 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 Y_RNA.26-201ENST00000362539 101 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 RNU6-271P-201ENST00000363858 105 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 RNA5SP493-201ENST00000364115 91 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 SNORD114-6-201ENST00000364393 72 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 RNU6-806P-201ENST00000365147 105 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 Y_RNA.452-201ENST00000384202 108 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 MIR504-201ENST00000385065 83 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 SNORA48.3-201ENST00000391081 134 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 HMGN2P39-201ENST00000398005 273 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 MIR1302-6-201ENST00000408466 90 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 RNU4-30P-201ENST00000410245 143 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 Y_RNA.602-201ENST00000410535 92 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.39□□□□□ -2.03
COL20A1Q9P218 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.39□□□□□ -2.03
COL20A1Q9P218 ATP5J2P3-201ENST00000451550 258 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 SNORA70.12-201ENST00000516084 153 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 RNU6-496P-201ENST00000516145 99 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 AC004817.2-201ENST00000561794 651 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.39□□□□□ -2.03
COL20A1Q9P218 MIR4503-201ENST00000582187 83 ntBASIC2.39□□□□□ -2.03
COL20A1Q9P218 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms