Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.74□□□□□ -1.97
KCMF1Q9P0J7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 RNU1-35P-201ENST00000362782 153 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 RNU6-271P-201ENST00000363858 105 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 Y_RNA.240-201ENST00000364469 95 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 RNA5SP125-201ENST00000364843 120 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 SNORA9.2-201ENST00000365361 133 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 AL139132.1-201ENST00000431587 344 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 AC025750.2-201ENST00000442609 450 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 RPS20P10-201ENST00000451209 253 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 AC010409.1-201ENST00000487382 476 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 SUMO2P18-201ENST00000518873 252 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 AC100767.1-201ENST00000528178 123 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 AC090115.4-201ENST00000609970 188 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
KCMF1Q9P0J7 AC009487.4-201ENST00000624969 3585 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AL356292.1-201ENST00000283110 373 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 Y_RNA.7-201ENST00000362352 102 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 SNORD114-7-201ENST00000362520 77 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 SNORD116-13-201ENST00000384408 92 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AL590004.2-201ENST00000404787 371 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 RNU2-48P-201ENST00000410694 191 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AC016909.1-201ENST00000415916 166 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AC008134.1-201ENST00000420943 193 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AC003685.2-201ENST00000422795 395 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 RPS29P6-201ENST00000438196 145 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 RPL39P40-201ENST00000445481 146 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 RPS26P55-201ENST00000471178 356 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AP004217.1-201ENST00000480579 346 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AC093259.1-201ENST00000509755 300 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 RNA5SP20-201ENST00000515976 84 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 RNU6-1278P-201ENST00000516130 107 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 RNU2-34P-201ENST00000516534 121 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 RNU6-667P-201ENST00000517186 102 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 MRPS18CP4-201ENST00000535821 231 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AC068647.2-201ENST00000637380 353 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 AL159152.1-201ENST00000635019 2587 ntBASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
KCMF1Q9P0J7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
KCMF1Q9P0J7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 RNU6-1205P-201ENST00000363625 106 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 SNORA80A-201ENST00000363922 136 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.238-201ENST00000364441 102 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 MIR518C-201ENST00000384822 101 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 AL355497.1-201ENST00000406262 551 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 AC123900.1-201ENST00000420390 96 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 MTCO1P44-201ENST00000441935 243 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 AC117454.1-201ENST00000491120 168 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 RNU6-56P-201ENST00000516986 93 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 AC021269.2-201ENST00000532318 330 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 MIR3616-201ENST00000584070 92 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 AC104465.1-201ENST00000611365 139 ntBASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
KCMF1Q9P0J7 U8.7-201ENST00000364940 136 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 SNORA8.3-201ENST00000384679 139 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 MIR592-201ENST00000384959 97 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 AL451074.5-201ENST00000415894 435 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 AC107083.1-201ENST00000439643 279 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 HSPE1P13-201ENST00000451143 297 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 RPS27P22-201ENST00000478056 241 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 SNORA4.4-201ENST00000515921 135 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 RNU6-63P-201ENST00000516690 95 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 RNU6-1212P-201ENST00000517023 104 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 MIR7106-201ENST00000612419 65 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 SCARNA15.3-201ENST00000626315 122 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 SCARNA4.1-201ENST00000628597 123 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 AC021753.1-201ENST00000635724 168 ntBASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.24-201ENST00000362508 103 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.111-201ENST00000363248 100 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.182-201ENST00000363880 111 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 SNORD56.5-201ENST00000364281 72 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 Y_RNA.572-201ENST00000384757 98 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 MIR512-1-201ENST00000384913 84 ntBASIC2.69□□□□□ -1.98
KCMF1Q9P0J7 AL445687.1-201ENST00000439946 251 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms