Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 Y_RNA.580-201ENST00000391004 95 ntBASIC3.12□□□□□ -1.91
UBP1Q9NZI7 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
UBP1Q9NZI7 RNU5E-9P-201ENST00000411164 104 ntBASIC3.12□□□□□ -1.91
UBP1Q9NZI7 RN7SL20P-201ENST00000488827 297 ntBASIC3.12□□□□□ -1.91
UBP1Q9NZI7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.12□□□□□ -1.91
UBP1Q9NZI7 RNU6-406P-201ENST00000516470 107 ntBASIC3.12□□□□□ -1.91
UBP1Q9NZI7 AC104465.1-201ENST00000611365 139 ntBASIC3.12□□□□□ -1.91
UBP1Q9NZI7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
UBP1Q9NZI7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
UBP1Q9NZI7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBP1Q9NZI7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBP1Q9NZI7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBP1Q9NZI7 RNU6-525P-201ENST00000363685 104 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 Y_RNA.272-201ENST00000364696 102 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 RNU6-804P-201ENST00000384286 107 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 RNU11-5P-201ENST00000391216 129 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 EDDM3CP-201ENST00000415977 425 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.11□□□□□ -1.91
UBP1Q9NZI7 AL353689.1-201ENST00000438895 199 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 RNU1-131P-201ENST00000458943 161 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.11□□□□□ -1.91
UBP1Q9NZI7 RNU7-200P-201ENST00000516105 62 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 RNU7-172P-201ENST00000517125 64 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 AC015720.1-201ENST00000565251 277 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.11□□□□□ -1.91
UBP1Q9NZI7 U6.73-201ENST00000619194 103 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 MTND1P7-201ENST00000632801 297 ntBASIC3.11□□□□□ -1.91
UBP1Q9NZI7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.11□□□□□ -1.91
UBP1Q9NZI7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBP1Q9NZI7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.1□□□□□ -1.91
UBP1Q9NZI7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
UBP1Q9NZI7 RNU6-674P-201ENST00000363831 107 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 SNORA38.1-201ENST00000364172 131 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 RNA5SP511-201ENST00000410487 115 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 AC060773.1-201ENST00000421698 310 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 AC104389.3-201ENST00000445629 235 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 RNU6-437P-201ENST00000459408 95 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 RN7SL807P-201ENST00000470923 297 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 RPL23AP54-201ENST00000495129 419 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 RPS29P21-201ENST00000496272 170 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 RNU6-63P-201ENST00000516690 95 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 SNORA70.24-201ENST00000517233 118 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 AC245166.1-201ENST00000521012 253 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.1□□□□□ -1.91
UBP1Q9NZI7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.1□□□□□ -1.91
UBP1Q9NZI7 AC007318.2-201ENST00000620999 243 ntBASIC3.1□□□□□ -1.91
UBP1Q9NZI7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
UBP1Q9NZI7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.09□□□□□ -1.91
UBP1Q9NZI7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBP1Q9NZI7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
UBP1Q9NZI7 RNU4-84P-201ENST00000364200 139 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 Y_RNA.229-201ENST00000364347 113 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 RNU6-1180P-201ENST00000364935 107 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 SNORA72-201ENST00000384339 132 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 MIR491-201ENST00000384877 84 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 RNU6-1228P-201ENST00000391014 107 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.09□□□□□ -1.91
UBP1Q9NZI7 UQCRHP3-201ENST00000451503 251 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 RN7SL75P-201ENST00000461926 281 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 AC011406.1-201ENST00000512440 370 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.09□□□□□ -1.91
UBP1Q9NZI7 MIR4431-201ENST00000579990 94 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 AL353149.1-201ENST00000610667 244 ntBASIC3.09□□□□□ -1.91
UBP1Q9NZI7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
UBP1Q9NZI7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBP1Q9NZI7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
UBP1Q9NZI7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.09□□□□□ -1.92
UBP1Q9NZI7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.09□□□□□ -1.92
UBP1Q9NZI7 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 Y_RNA.8-201ENST00000362353 102 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 RNA5SP374-201ENST00000362939 125 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 RNY3P5-201ENST00000384127 102 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 SNORA54-201ENST00000384281 123 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 Y_RNA.572-201ENST00000384757 98 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 RN7SKP284-201ENST00000411002 343 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 SEPT7P4-201ENST00000437076 306 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 HMGN2P34-201ENST00000437647 269 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 AC245102.2-201ENST00000448956 180 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.08□□□□□ -1.92
UBP1Q9NZI7 AC008885.1-201ENST00000514930 301 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 SCARNA8-201ENST00000515924 131 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 RNU6-1007P-201ENST00000516586 107 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.08□□□□□ -1.92
UBP1Q9NZI7 AC109810.1-201ENST00000534066 224 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 MIR5004-201ENST00000579078 107 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 LARP7P3-201ENST00000579888 337 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 YPEL5P2-201ENST00000605553 359 ntBASIC3.08□□□□□ -1.92
UBP1Q9NZI7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.08□□□□□ -1.92
UBP1Q9NZI7 AL365361.1-201ENST00000566942 3481 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBP1Q9NZI7 AC073325.2-201ENST00000339545 159 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 snoU2-30.2-201ENST00000362805 70 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 RNU1-96P-201ENST00000364163 162 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 RNU6-449P-201ENST00000383914 107 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 Y_RNA.398-201ENST00000383952 99 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 RNU6-160P-201ENST00000384591 107 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 RNU6-376P-201ENST00000384731 106 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 RNA5SP496-201ENST00000391240 109 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms