Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 AC245102.2-201ENST00000448956 180 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 Y_RNA.649-201ENST00000459077 103 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 RN7SL93P-201ENST00000463035 293 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 AC025518.1-201ENST00000479856 347 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 CKS1BP2-201ENST00000497342 240 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 RAC1P2-201ENST00000511164 579 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 RN7SKP19-201ENST00000516016 252 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 SNORA72.7-201ENST00000516349 94 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 RNU7-143P-201ENST00000516781 65 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 NDUFA5P6-201ENST00000542110 379 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 AC018630.3-201ENST00000542637 96 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 AC104984.5-201ENST00000586878 94 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 AL022345.2-201ENST00000606307 135 ntBASIC3.2□□□□□ -1.9
GSX1Q9H4S2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GSX1Q9H4S2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GSX1Q9H4S2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 RNU1-18P-201ENST00000363062 164 ntBASIC3.19□□□□□ -1.9
GSX1Q9H4S2 RNU6-743P-201ENST00000364151 106 ntBASIC3.19□□□□□ -1.9
GSX1Q9H4S2 RNU6-880P-201ENST00000384526 107 ntBASIC3.19□□□□□ -1.9
GSX1Q9H4S2 Y_RNA.617-201ENST00000410920 90 ntBASIC3.19□□□□□ -1.9
GSX1Q9H4S2 Y_RNA.651-201ENST00000459380 103 ntBASIC3.19□□□□□ -1.9
GSX1Q9H4S2 AC091178.2-201ENST00000584401 117 ntBASIC3.19□□□□□ -1.9
GSX1Q9H4S2 AC025166.1-201ENST00000612411 163 ntBASIC3.19□□□□□ -1.9
GSX1Q9H4S2 MIR6715A-201ENST00000615929 79 ntBASIC3.19□□□□□ -1.9
GSX1Q9H4S2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.19□□□□□ -1.9
GSX1Q9H4S2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
GSX1Q9H4S2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.18□□□□□ -1.9
GSX1Q9H4S2 Y_RNA.52-201ENST00000362760 96 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 RNU6-1138P-201ENST00000365359 106 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 RNU6-546P-201ENST00000383991 107 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 MIR218-1-201ENST00000384999 110 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 AC005326.1-201ENST00000429197 123 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 RPS12P18-201ENST00000442381 270 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.18□□□□□ -1.9
GSX1Q9H4S2 RPL31P61-201ENST00000496160 376 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 RNU6-781P-201ENST00000516377 101 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 RNU2-60P-201ENST00000517290 128 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.18□□□□□ -1.9
GSX1Q9H4S2 MIR5187-201ENST00000583479 76 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 RNVU1-4-201ENST00000612985 164 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.18□□□□□ -1.9
GSX1Q9H4S2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
GSX1Q9H4S2 MIR1248-201ENST00000629190 106 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
GSX1Q9H4S2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GSX1Q9H4S2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GSX1Q9H4S2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
GSX1Q9H4S2 AC091564.4-201ENST00000533934 2194 ntBASIC3.18□□□□□ -1.9
GSX1Q9H4S2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 RNU6-508P-201ENST00000363231 103 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 Y_RNA.486-201ENST00000384398 107 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 MIR562-201ENST00000384894 95 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 MIR624-201ENST00000385217 97 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 RNU2-32P-201ENST00000411193 191 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 RNU6-504P-201ENST00000516568 104 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 RNU6-1096P-201ENST00000517089 102 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 AC008011.1-201ENST00000545989 227 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 AL137849.1-201ENST00000604767 169 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 AC110079.1-202ENST00000635213 138 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 MIR4679-1-201ENST00000637619 75 ntBASIC3.17□□□□□ -1.9
GSX1Q9H4S2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
GSX1Q9H4S2 SNORA14A-201ENST00000364773 135 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 RNA5SP126-201ENST00000365092 109 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.16□□□□□ -1.9
GSX1Q9H4S2 COTL1P1-201ENST00000422309 375 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 AF228730.3-201ENST00000436691 102 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 AC006028.1-201ENST00000438379 402 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 AL161788.1-201ENST00000441805 169 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.16□□□□□ -1.9
GSX1Q9H4S2 AL031737.1-201ENST00000450125 223 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 AC006483.1-201ENST00000487308 313 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.16□□□□□ -1.9
GSX1Q9H4S2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.16□□□□□ -1.9
GSX1Q9H4S2 MIR4474-201ENST00000579189 78 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 YPEL5P2-201ENST00000605553 359 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 AC090115.4-201ENST00000609970 188 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 AL591424.2-201ENST00000617023 128 ntBASIC3.16□□□□□ -1.9
GSX1Q9H4S2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
GSX1Q9H4S2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
GSX1Q9H4S2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms