Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 Y_RNA.229-201ENST00000364347 113 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 RNA5SP205-201ENST00000364653 136 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.337-201ENST00000365312 102 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.542-201ENST00000384641 111 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 MIR627-201ENST00000384979 97 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 MIR15B-201ENST00000385045 98 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 AL031121.1-201ENST00000406553 254 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 RNU6-383P-201ENST00000410864 94 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF38Q9H0F5 SRIP1-201ENST00000489235 288 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 RN7SKP282-201ENST00000516824 299 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF38Q9H0F5 AC112693.2-201ENST00000556538 232 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 MIR3117-201ENST00000584034 78 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 AL670379.2-201ENST00000604983 252 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.1□□□□□ -1.91
RNF38Q9H0F5 MIR6852-201ENST00000621699 66 ntBASIC3.1□□□□□ -1.91
RNF38Q9H0F5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF38Q9H0F5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.1□□□□□ -1.91
RNF38Q9H0F5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF38Q9H0F5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.09□□□□□ -1.91
RNF38Q9H0F5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RNF38Q9H0F5 Y_RNA.127-201ENST00000363386 109 ntBASIC3.09□□□□□ -1.91
RNF38Q9H0F5 MIR526A2-201ENST00000390198 65 ntBASIC3.09□□□□□ -1.91
RNF38Q9H0F5 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
RNF38Q9H0F5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RNF38Q9H0F5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.09□□□□□ -1.91
RNF38Q9H0F5 RPL32P35-201ENST00000415214 394 ntBASIC3.09□□□□□ -1.91
RNF38Q9H0F5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.09□□□□□ -1.91
RNF38Q9H0F5 AL135938.1-201ENST00000443141 297 ntBASIC3.09□□□□□ -1.91
RNF38Q9H0F5 AC074290.1-201ENST00000448883 135 ntBASIC3.09□□□□□ -1.91
RNF38Q9H0F5 AC080013.2-201ENST00000460866 323 ntBASIC3.09□□□□□ -1.91
RNF38Q9H0F5 AC117454.1-201ENST00000491120 168 ntBASIC3.09□□□□□ -1.91
RNF38Q9H0F5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
RNF38Q9H0F5 MIR3616-201ENST00000584070 92 ntBASIC3.09□□□□□ -1.91
RNF38Q9H0F5 MIR7106-201ENST00000612419 65 ntBASIC3.09□□□□□ -1.91
RNF38Q9H0F5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RNF38Q9H0F5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.09□□□□□ -1.92
RNF38Q9H0F5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
RNF38Q9H0F5 ZNF702P-202ENST00000434269 1966 ntBASIC3.09□□□□□ -1.92
RNF38Q9H0F5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
RNF38Q9H0F5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RNF38Q9H0F5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF38Q9H0F5 SNORA51.4-201ENST00000364993 124 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 Y_RNA.353-201ENST00000365440 108 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 SNORD116-14-201ENST00000383894 92 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 SNORD116-17-201ENST00000383929 92 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 SNORD116-15-201ENST00000384445 92 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 SNORD116-19-201ENST00000384729 92 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 RNU6-376P-201ENST00000384731 106 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 AL606845.1-201ENST00000404881 255 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF38Q9H0F5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 MIR449C-201ENST00000516047 92 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 SNORA70.12-201ENST00000516084 153 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.08□□□□□ -1.92
RNF38Q9H0F5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF38Q9H0F5 MIR4724-201ENST00000579485 89 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 AL356280.1-201ENST00000603614 379 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 AL391903.3-201ENST00000612158 163 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 AC090517.3-201ENST00000625170 141 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 AC068647.2-201ENST00000637380 353 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RNF38Q9H0F5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF38Q9H0F5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF38Q9H0F5 AL391516.1-201ENST00000554380 2449 ntBASIC3.08□□□□□ -1.92
RNF38Q9H0F5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
RNF38Q9H0F5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
RNF38Q9H0F5 RNU6-1180P-201ENST00000364935 107 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 U8.7-201ENST00000364940 136 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 RNU6-215P-201ENST00000365169 102 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 Y_RNA.361-201ENST00000365515 120 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 RNU6-643P-201ENST00000384018 107 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 RNU6-44P-201ENST00000384045 107 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 RNU6-460P-201ENST00000391158 108 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 RNA5SP344-201ENST00000411081 104 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF38Q9H0F5 RN7SKP132-201ENST00000516001 208 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 RNU6-1098P-201ENST00000516772 96 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
RNF38Q9H0F5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.07□□□□□ -1.92
RNF38Q9H0F5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
RNF38Q9H0F5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.07□□□□□ -1.92
RNF38Q9H0F5 RNU1-72P-201ENST00000362976 153 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 SNORA5B-201ENST00000363786 132 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 SNORD14D-201ENST00000384390 87 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 AL139095.1-201ENST00000404326 391 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 CYCSP49-201ENST00000420810 319 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 UBBP3-201ENST00000445497 241 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 HMGN2P9-201ENST00000476875 229 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 AC083906.5-201ENST00000503722 328 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 Y_RNA.686-201ENST00000516548 134 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 RNU6-56P-201ENST00000516986 93 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 AC027419.1-201ENST00000522976 328 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 AL031274.2-201ENST00000599419 203 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 AC011603.4-201ENST00000611325 277 ntBASIC3.06□□□□□ -1.92
RNF38Q9H0F5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms