Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 S100A11P2-201ENST00000467589 312 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 RPL27AP5-201ENST00000469428 449 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 RPS26P55-201ENST00000471178 356 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 RPL36AP21-201ENST00000490372 323 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 AC117454.1-201ENST00000491120 168 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 MIR449C-201ENST00000516047 92 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 AC112693.2-201ENST00000556538 232 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 LARP7P3-201ENST00000579888 337 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 MIR4753-201ENST00000585119 83 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 AP003357.1-201ENST00000604497 148 ntBASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
FOXP3Q9BZS1 Y_RNA.218-201ENST00000364218 104 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNU6-234P-201ENST00000365229 104 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNU6-728P-201ENST00000365375 104 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNU6-1323P-201ENST00000384025 107 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNY3P5-201ENST00000384127 102 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNU6-975P-201ENST00000384296 105 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 SNORD116-13-201ENST00000384408 92 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNU6-1274P-201ENST00000384557 107 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RN7SKP123-201ENST00000410732 291 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNU6-383P-201ENST00000410864 94 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNU4-47P-201ENST00000410876 114 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 COTL1P1-201ENST00000422309 375 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RPL23AP58-201ENST00000440453 469 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNU7-197P-201ENST00000458836 62 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RN7SL20P-201ENST00000488827 297 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 AC083906.5-201ENST00000503722 328 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 AC010598.1-201ENST00000510378 103 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 SCARNA17.1-201ENST00000516211 143 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNU6-561P-201ENST00000516222 102 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 SCARNA17.2-201ENST00000516334 143 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 RNU6-971P-201ENST00000516920 106 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 SCARNA17.4-201ENST00000614296 143 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
FOXP3Q9BZS1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FOXP3Q9BZS1 AC009487.4-201ENST00000624969 3585 ntBASIC3.15□□□□□ -1.9
FOXP3Q9BZS1 RNU1-72P-201ENST00000362976 153 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 Y_RNA.127-201ENST00000363386 109 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 RNU6-944P-201ENST00000364023 107 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 RNU6-407P-201ENST00000365280 104 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 Y_RNA.420-201ENST00000384043 110 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 RNU4-43P-201ENST00000410628 137 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 SNORD65B-201ENST00000459126 73 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 RN7SL863P-201ENST00000462370 296 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 AP004217.1-201ENST00000480579 346 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 AC109329.2-201ENST00000519658 482 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 AC127455.1-201ENST00000565496 145 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 MIR3646-201ENST00000578301 84 ntBASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FOXP3Q9BZS1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 MIR539-201ENST00000365690 78 ntBASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 SNORA20-201ENST00000384662 132 ntBASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 SNORD15B-201ENST00000384714 146 ntBASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 SNORA26.7-201ENST00000391288 122 ntBASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 RNA5SP344-201ENST00000411081 104 ntBASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 ATP5EP1-201ENST00000510257 156 ntBASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 SCARNA11.3-201ENST00000517276 130 ntBASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 AC018630.3-201ENST00000542637 96 ntBASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 AC093732.2-201ENST00000607950 274 ntBASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXP3Q9BZS1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 AC091564.4-201ENST00000533934 2194 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 Y_RNA.71-201ENST00000362892 104 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 Y_RNA.261-201ENST00000364631 102 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 SNORD31B-201ENST00000364977 69 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 CD24P4-201ENST00000382840 243 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 SNORA7.4-201ENST00000384249 137 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 SNORD14D-201ENST00000384390 87 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 MIR1278-201ENST00000408753 81 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 AC025750.2-201ENST00000442609 450 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 RPL23AP94-201ENST00000512518 302 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 RNU7-116P-201ENST00000516940 62 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 AC007536.1-201ENST00000533382 349 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 POLR3GP1-201ENST00000594073 261 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 AC005972.2-201ENST00000604690 348 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 AC110079.1-202ENST00000635213 138 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms