Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SCARNA8-201ENST00000515924 131 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 SNORA25.12-201ENST00000516202 82 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 Y_RNA.686-201ENST00000516548 134 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 RNU2-44P-201ENST00000516795 194 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX1Q92499 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX1Q92499 MIR5006-201ENST00000583027 110 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 AC013791.1-201ENST00000616619 62 ntBASIC3.21□□□□□ -1.9
DDX1Q92499 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX1Q92499 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
DDX1Q92499 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX1Q92499 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DDX1Q92499 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX1Q92499 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
DDX1Q92499 MIR22-201ENST00000362190 85 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 RNU4-82P-201ENST00000362443 140 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 RNU6-1298P-201ENST00000362456 101 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 RNU1-72P-201ENST00000362976 153 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 SNORD32B-201ENST00000364460 84 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 SNORA18.2-201ENST00000383865 132 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 RNU6-80P-201ENST00000384195 107 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 SNORA20-201ENST00000384662 132 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 RNU6-376P-201ENST00000384731 106 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 RNU2-63P-201ENST00000410792 194 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 AL161788.1-201ENST00000441805 169 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 RPS20P10-201ENST00000451209 253 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.2□□□□□ -1.9
DDX1Q92499 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 RNU4-57P-201ENST00000515980 135 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX1Q92499 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX1Q92499 MIR3117-201ENST00000584034 78 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX1Q92499 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DDX1Q92499 AC134026.1-201ENST00000623249 2239 ntBASIC3.2□□□□□ -1.9
DDX1Q92499 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
DDX1Q92499 RNU6-461P-201ENST00000364195 107 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 MIR539-201ENST00000365690 78 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 RNU6-1274P-201ENST00000384557 107 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 AC022018.1-201ENST00000430685 241 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 EEF1B2P7-201ENST00000451177 676 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 RN7SL633P-201ENST00000488974 297 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 AC083906.5-201ENST00000503722 328 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 AC107027.2-201ENST00000512197 115 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 RNU6-659P-201ENST00000516454 104 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 RNA5SP367-201ENST00000516557 118 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 AC012640.5-201ENST00000623897 319 ntBASIC3.19□□□□□ -1.9
DDX1Q92499 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DDX1Q92499 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DDX1Q92499 RNU6-1048P-201ENST00000364054 107 ntBASIC3.18□□□□□ -1.9
DDX1Q92499 SNORA71.1-201ENST00000364523 117 ntBASIC3.18□□□□□ -1.9
DDX1Q92499 Y_RNA.572-201ENST00000384757 98 ntBASIC3.18□□□□□ -1.9
DDX1Q92499 RNA5SP475-201ENST00000410568 110 ntBASIC3.18□□□□□ -1.9
DDX1Q92499 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX1Q92499 RNU6-1211P-201ENST00000459179 105 ntBASIC3.18□□□□□ -1.9
DDX1Q92499 TRBV12-1-201ENST00000479785 344 ntBASIC3.18□□□□□ -1.9
DDX1Q92499 AC109810.1-201ENST00000534066 224 ntBASIC3.18□□□□□ -1.9
DDX1Q92499 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX1Q92499 AL356280.1-201ENST00000603614 379 ntBASIC3.18□□□□□ -1.9
DDX1Q92499 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX1Q92499 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX1Q92499 FAM35CP-201ENST00000554755 2470 ntBASIC3.18□□□□□ -1.9
DDX1Q92499 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX1Q92499 SNORD115-30-201ENST00000364117 82 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 RNU6-1264P-201ENST00000383891 107 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 Y_RNA.420-201ENST00000384043 110 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 MIR627-201ENST00000384979 97 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 MIR513C-201ENST00000401352 84 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 AL355497.1-201ENST00000406262 551 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX1Q92499 AC091826.1-201ENST00000514065 313 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 RNU5F-4P-201ENST00000516581 114 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 RNU6-344P-201ENST00000516635 111 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 RNU6-453P-201ENST00000516819 85 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
DDX1Q92499 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX1Q92499 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX1Q92499 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX1Q92499 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX1Q92499 RNU6-727P-201ENST00000363592 107 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 RNU6-944P-201ENST00000364023 107 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 RNU4-10P-201ENST00000364383 140 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 Y_RNA.361-201ENST00000365515 120 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 DYNLT3P1-201ENST00000378574 347 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 SNORA72.4-201ENST00000384174 132 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 MIR504-201ENST00000385065 83 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 MIR616-201ENST00000385293 97 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 RNU2-52P-201ENST00000410680 190 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 RPS29P6-201ENST00000438196 145 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX1Q92499 Z96811.1-201ENST00000445880 108 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX1Q92499 SNORD11B-201ENST00000607707 90 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 AL449363.1-201ENST00000617815 186 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 TUG1_4.1-201ENST00000619464 181 ntBASIC3.16□□□□□ -1.9
DDX1Q92499 MIR7843-201ENST00000622274 79 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms