Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 MIR2682-201ENST00000580305 110 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR3117-201ENST00000584034 78 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 AL049861.1-201ENST00000603130 150 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR7112-201ENST00000616126 65 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC091953.5-201ENST00000622919 233 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC006435.5-201ENST00000624486 112 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNA5SP383-201ENST00000362934 120 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORA68.1-201ENST00000364537 132 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU6-1082P-201ENST00000364574 107 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORD15B-201ENST00000384714 146 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNA5SP496-201ENST00000391240 109 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 RN7SKP101-201ENST00000411376 320 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 RPL23AP58-201ENST00000440453 469 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 AL161788.1-201ENST00000441805 169 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 MTCO1P44-201ENST00000441935 243 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 RPL27AP5-201ENST00000469428 449 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 CKS1BP2-201ENST00000497342 240 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC093331.1-201ENST00000521474 169 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC107294.3-201ENST00000609211 526 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC009487.4-201ENST00000624969 3585 ntBASIC2.94□□□□□ -1.94
HLA-DQA1Q5Y7H0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC073346.2-201ENST00000624724 2058 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR539-201ENST00000365690 78 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU6-1336P-201ENST00000383886 109 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORD20-201ENST00000384550 80 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 Y_RNA.629-201ENST00000411368 105 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC025750.2-201ENST00000442609 450 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 RN7SL330P-201ENST00000469709 307 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 SEM1P1-201ENST00000506694 209 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU6-991P-201ENST00000516168 107 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU2-56P-201ENST00000516826 190 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR378D2-201ENST00000580636 98 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 AL021707.8-201ENST00000609428 183 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC011603.4-201ENST00000611325 277 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 TUG1_4.1-201ENST00000619464 181 ntBASIC2.93□□□□□ -1.94
HLA-DQA1Q5Y7H0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC091152.2-201ENST00000591628 2569 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU1-22P-201ENST00000363334 158 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORD116-14-201ENST00000383894 92 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORD116-17-201ENST00000383929 92 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORA72-201ENST00000384339 132 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORD116-15-201ENST00000384445 92 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORD116-19-201ENST00000384729 92 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 RPS29P12-201ENST00000460178 152 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC093259.1-201ENST00000509755 300 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR5195-201ENST00000583555 115 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR4438-201ENST00000585271 93 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 AL359881.1-201ENST00000602916 267 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC120024.3-201ENST00000603167 156 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC103988.1-201ENST00000566382 2177 ntBASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
HLA-DQA1Q5Y7H0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 Y_RNA.251-201ENST00000364551 99 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR95-201ENST00000385072 81 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORA79-201ENST00000408376 140 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC010154.1-201ENST00000425857 269 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 RPS4XP11-201ENST00000446897 772 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 RN7SL442P-201ENST00000473804 320 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 RN7SL504P-201ENST00000494496 287 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC023141.11-201ENST00000508864 202 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC097462.1-201ENST00000514125 324 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU2-34P-201ENST00000516534 121 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU7-172P-201ENST00000517125 64 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORA70.24-201ENST00000517233 118 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR5004-201ENST00000579078 107 ntBASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.91□□□□□ -1.94
HLA-DQA1Q5Y7H0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.94
HLA-DQA1Q5Y7H0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.94
HLA-DQA1Q5Y7H0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 DYNLT3P1-201ENST00000378574 347 ntBASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 SNORA75.5-201ENST00000391291 81 ntBASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 RNU2-48P-201ENST00000410694 191 ntBASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC123900.1-201ENST00000420390 96 ntBASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 AL357134.1-201ENST00000445848 426 ntBASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 Y_RNA.686-201ENST00000516548 134 ntBASIC2.9□□□□□ -1.95
HLA-DQA1Q5Y7H0 AC104027.1-201ENST00000521887 300 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms