Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC011476.5-201ENST00000615594 130 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 AC008873.1-201ENST00000625051 138 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.15□□□□□ -2.07
CLCN3P51790 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 LINC02555-201ENST00000563933 1951 ntBASIC2.15□□□□□ -2.07
CLCN3P51790 AC009487.4-201ENST00000624969 3585 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CLCN3P51790 MIR410-201ENST00000362222 80 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 RNU6-702P-201ENST00000364982 107 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 Y_RNA.376-201ENST00000365638 108 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 MIR586-201ENST00000385035 97 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 SNORA40.18-201ENST00000391200 128 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 MIR1302-3-201ENST00000408128 138 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 MIR1283-1-201ENST00000408494 87 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 RNU2-20P-201ENST00000410425 191 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 ELOCP21-201ENST00000412558 336 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 AL445685.2-201ENST00000422551 342 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 AC139712.2-201ENST00000424302 339 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 AC005002.2-201ENST00000438228 269 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 RNU1-131P-201ENST00000458943 161 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 SNORA25.14-201ENST00000516481 132 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 RNU2-34P-201ENST00000516534 121 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCN3P51790 AP003733.2-201ENST00000529409 171 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 AC023157.2-201ENST00000540596 141 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 AK6P2-201ENST00000549020 471 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 AC078899.2-201ENST00000595282 212 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 SNORD11B-201ENST00000607707 90 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.14□□□□□ -2.07
CLCN3P51790 MIR6895-201ENST00000613497 78 ntBASIC2.14□□□□□ -2.07
CLCN3P51790 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CLCN3P51790 RNU6-961P-201ENST00000363893 105 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 RNU6-793P-201ENST00000384233 104 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 Y_RNA.483-201ENST00000384380 101 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 RNU6-160P-201ENST00000384591 107 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 Y_RNA.562-201ENST00000384695 113 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 AC114982.1-201ENST00000469402 321 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 AC098869.1-201ENST00000481627 292 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 RPL23AP63-201ENST00000498752 471 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 AC074133.1-201ENST00000515696 183 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 SNORA40.9-201ENST00000515895 93 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 Y_RNA.683-201ENST00000516508 93 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 CYCSP23-201ENST00000519781 313 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.13□□□□□ -2.07
CLCN3P51790 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.13□□□□□ -2.07
CLCN3P51790 MIR4529-201ENST00000578110 78 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 Y_RNA.772-201ENST00000606692 102 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 AC022202.1-201ENST00000613515 211 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
CLCN3P51790 AC127459.3-201ENST00000624328 466 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 MIR203B-201ENST00000636080 86 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLCN3P51790 MTND5P35-201ENST00000557537 1720 ntBASIC2.13□□□□□ -2.07
CLCN3P51790 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.13□□□□□ -2.07
CLCN3P51790 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLCN3P51790 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLCN3P51790 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLCN3P51790 Y_RNA.84-201ENST00000363011 104 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 Y_RNA.401-201ENST00000383965 117 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 Y_RNA.570-201ENST00000384750 101 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 MIR518A2-201ENST00000384966 87 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 Y_RNA.581-201ENST00000391017 97 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.12□□□□□ -2.07
CLCN3P51790 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.12□□□□□ -2.07
CLCN3P51790 AC074290.1-201ENST00000448883 135 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 PCNPP5-201ENST00000452246 481 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 NDUFB4P10-201ENST00000452541 359 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 AC025033.1-201ENST00000463883 194 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 RNU7-193P-201ENST00000516723 65 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 SNORA40.15-201ENST00000516884 107 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 RNU6-548P-201ENST00000517083 115 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 AP002001.1-203ENST00000534002 267 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 RRN3P3-201ENST00000549207 578 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 MIR3671-201ENST00000580455 88 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 MIR4753-201ENST00000585119 83 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 AP001282.2-201ENST00000616149 309 ntBASIC2.12□□□□□ -2.07
CLCN3P51790 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CLCN3P51790 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLCN3P51790 Y_RNA.143-201ENST00000363520 106 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 Y_RNA.179-201ENST00000363844 90 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 RNU6-1164P-201ENST00000364428 107 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 Y_RNA.461-201ENST00000384263 103 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 RNU6-937P-201ENST00000384325 106 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 MIR215-201ENST00000384858 110 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 RNA5SP465-201ENST00000391195 109 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 SNORA26.9-201ENST00000391322 122 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 SNORD23.1-201ENST00000408212 104 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 RNU6-1203P-201ENST00000410703 110 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 AL357134.1-201ENST00000445848 426 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 MTND1P19-201ENST00000511780 315 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 RNU6-496P-201ENST00000516145 99 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 RNY3P15-201ENST00000516297 97 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 AC055872.1-201ENST00000570978 278 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 MIR376A1-201ENST00000616574 68 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.11□□□□□ -2.07
CLCN3P51790 AC068205.3-201ENST00000636385 468 ntBASIC2.11□□□□□ -2.07
CLCN3P51790 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms