Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MTATP8P1-201ENST00000467115 207 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 RN7SKP49-201ENST00000516675 260 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 Y_RNA.715-201ENST00000517082 110 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 AC026470.2-201ENST00000561492 181 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 RPS29P30-201ENST00000600975 111 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 AC011476.5-201ENST00000615594 130 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
HNF4AP41235 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
HNF4AP41235 MTND5P35-201ENST00000557537 1720 ntBASIC1.86□□□□□ -2.11
HNF4AP41235 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.86□□□□□ -2.11
HNF4AP41235 RNU1-76P-201ENST00000362903 159 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 RNU6-793P-201ENST00000384233 104 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 SNORA67.2-201ENST00000384300 149 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 Y_RNA.471-201ENST00000384312 102 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 Y_RNA.551-201ENST00000384661 102 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 RNA5SP504-201ENST00000410676 117 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.85□□□□□ -2.11
HNF4AP41235 AL445685.2-201ENST00000422551 342 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.85□□□□□ -2.11
HNF4AP41235 RPEP5-201ENST00000441137 268 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 MTND5P22-201ENST00000458380 195 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 AC010655.3-201ENST00000478818 450 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 RPS23P5-201ENST00000495419 428 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 ATP5EP1-201ENST00000510257 156 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 RNU5F-4P-201ENST00000516581 114 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.85□□□□□ -2.11
HNF4AP41235 CBX3P4-201ENST00000538909 354 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 RRN3P3-201ENST00000549207 578 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.85□□□□□ -2.11
HNF4AP41235 MIR4659A-201ENST00000580269 81 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.85□□□□□ -2.11
HNF4AP41235 AC240442.1-201ENST00000616055 283 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.85□□□□□ -2.11
HNF4AP41235 AC245060.5-201ENST00000610778 3293 ntBASIC1.85□□□□□ -2.11
HNF4AP41235 RNU1-62P-201ENST00000362599 164 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 SNORD87-201ENST00000364849 89 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 Y_RNA.380-201ENST00000365663 111 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 SNORA11.2-201ENST00000408318 127 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 AC139712.2-201ENST00000424302 339 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 AL358176.2-201ENST00000425769 204 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.84□□□□□ -2.11
HNF4AP41235 AC009237.7-201ENST00000447357 229 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 AC007395.1-201ENST00000451333 677 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 PCNPP5-201ENST00000452246 481 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 HMGN2P23-201ENST00000456759 269 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 RNU6-397P-201ENST00000516226 104 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 Y_RNA.683-201ENST00000516508 93 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 SUMO2P18-201ENST00000518873 252 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 AK6P2-201ENST00000549020 471 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 SUB1P4-201ENST00000566062 339 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.84□□□□□ -2.11
HNF4AP41235 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.84□□□□□ -2.11
HNF4AP41235 MIR3945-201ENST00000581853 98 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 AL390123.1-201ENST00000603216 237 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 RAC1P9-201ENST00000604990 392 ntBASIC1.84□□□□□ -2.11
HNF4AP41235 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.84□□□□□ -2.12
HNF4AP41235 RNU6-545P-201ENST00000362681 104 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 Y_RNA.133-201ENST00000363428 110 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 RNU6-961P-201ENST00000363893 105 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 Y_RNA.214-201ENST00000364201 112 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 RNU4-50P-201ENST00000364361 141 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 SNORD31B-201ENST00000364977 69 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 Y_RNA.415-201ENST00000384012 112 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 RNU6-1026P-201ENST00000384465 108 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 Y_RNA.526-201ENST00000384572 110 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 RNU6-1105P-201ENST00000384774 107 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 MIR320B2-201ENST00000408479 138 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 MIR548F4-201ENST00000408515 105 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 Y_RNA.595-201ENST00000410403 105 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 ELOCP21-201ENST00000412558 336 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.83□□□□□ -2.12
HNF4AP41235 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.83□□□□□ -2.12
HNF4AP41235 ELOCP20-201ENST00000422460 345 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 SDAD1P3-201ENST00000427380 333 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 FCF1P4-201ENST00000448326 183 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 RNU7-14P-201ENST00000459331 62 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 RPL26P26-201ENST00000480251 434 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 RNU6-344P-201ENST00000516635 111 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 RNU6-897P-201ENST00000517135 105 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 AC131281.1-201ENST00000522984 164 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 MIR4285-201ENST00000581001 85 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 AL355297.3-201ENST00000604082 446 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 AL121655.1-201ENST00000605811 308 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.83□□□□□ -2.12
HNF4AP41235 AC010205.1-201ENST00000616668 449 ntBASIC1.83□□□□□ -2.12
HNF4AP41235 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.82□□□□□ -2.12
HNF4AP41235 Y_RNA.26-201ENST00000362539 101 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 SNORD114-1-201ENST00000362705 72 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 Y_RNA.210-201ENST00000364161 110 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 RNU6-806P-201ENST00000365147 105 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 SNORA63.7-201ENST00000365579 123 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 SNORD78.2-201ENST00000391076 69 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 AC019129.1-201ENST00000403786 261 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 MRPS35P2-201ENST00000508242 191 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 AC067942.3-201ENST00000512025 362 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 SNORA40.9-201ENST00000515895 93 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 RNU6-408P-201ENST00000515910 100 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 SNORA31.17-201ENST00000516953 127 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 RNU1-117P-201ENST00000517041 158 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 229.3 ms