Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CYP2C59P-201ENST00000457790 269 ntBASIC1.8□□□□□ -2.12
SHC1P29353 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.8□□□□□ -2.12
SHC1P29353 RNU6-496P-201ENST00000516145 99 ntBASIC1.8□□□□□ -2.12
SHC1P29353 RNU6-1098P-201ENST00000516772 96 ntBASIC1.8□□□□□ -2.12
SHC1P29353 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.8□□□□□ -2.12
SHC1P29353 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
SHC1P29353 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.8□□□□□ -2.12
SHC1P29353 CENPCP1-201ENST00000533085 2578 ntBASIC1.8□□□□□ -2.12
SHC1P29353 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SHC1P29353 Y_RNA.14-201ENST00000362415 103 ntBASIC1.79□□□□□ -2.12
SHC1P29353 Y_RNA.101-201ENST00000363154 102 ntBASIC1.79□□□□□ -2.12
SHC1P29353 Y_RNA.237-201ENST00000364439 102 ntBASIC1.79□□□□□ -2.12
SHC1P29353 Y_RNA.462-201ENST00000384268 102 ntBASIC1.79□□□□□ -2.12
SHC1P29353 Y_RNA.498-201ENST00000384460 102 ntBASIC1.79□□□□□ -2.12
SHC1P29353 Y_RNA.518-201ENST00000384552 113 ntBASIC1.79□□□□□ -2.12
SHC1P29353 Y_RNA.570-201ENST00000384750 101 ntBASIC1.79□□□□□ -2.12
SHC1P29353 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
SHC1P29353 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.79□□□□□ -2.12
SHC1P29353 UQCRBP2-201ENST00000447827 297 ntBASIC1.79□□□□□ -2.12
SHC1P29353 snoU13.15-201ENST00000459407 104 ntBASIC1.79□□□□□ -2.12
SHC1P29353 snoU13.26-201ENST00000459452 105 ntBASIC1.79□□□□□ -2.12
SHC1P29353 RPS27P21-201ENST00000486977 252 ntBASIC1.79□□□□□ -2.12
SHC1P29353 CKS1BP2-201ENST00000497342 240 ntBASIC1.79□□□□□ -2.12
SHC1P29353 DEFB108E-201ENST00000524692 240 ntBASIC1.79□□□□□ -2.12
SHC1P29353 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.79□□□□□ -2.12
SHC1P29353 MIR3128-201ENST00000581957 66 ntBASIC1.79□□□□□ -2.12
SHC1P29353 AC012433.1-201ENST00000588916 398 ntBASIC1.79□□□□□ -2.12
SHC1P29353 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.79□□□□□ -2.12
SHC1P29353 AC010900.2-201ENST00000604508 210 ntBASIC1.79□□□□□ -2.12
SHC1P29353 AL670379.2-201ENST00000604983 252 ntBASIC1.79□□□□□ -2.12
SHC1P29353 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.79□□□□□ -2.12
SHC1P29353 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
SHC1P29353 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SHC1P29353 RNU6-1175P-201ENST00000365200 107 ntBASIC1.78□□□□□ -2.12
SHC1P29353 Y_RNA.350-201ENST00000365409 98 ntBASIC1.78□□□□□ -2.12
SHC1P29353 Y_RNA.477-201ENST00000384352 108 ntBASIC1.78□□□□□ -2.12
SHC1P29353 Y_RNA.562-201ENST00000384695 113 ntBASIC1.78□□□□□ -2.12
SHC1P29353 MIR29B2-201ENST00000385055 81 ntBASIC1.78□□□□□ -2.12
SHC1P29353 Y_RNA.618-201ENST00000410949 107 ntBASIC1.78□□□□□ -2.12
SHC1P29353 RNU5A-5P-201ENST00000411054 116 ntBASIC1.78□□□□□ -2.12
SHC1P29353 RAB28P5-201ENST00000427490 651 ntBASIC1.78□□□□□ -2.12
SHC1P29353 AC009237.7-201ENST00000447357 229 ntBASIC1.78□□□□□ -2.12
SHC1P29353 RPL23AP3-201ENST00000453844 468 ntBASIC1.78□□□□□ -2.12
SHC1P29353 RNU6-625P-201ENST00000459412 107 ntBASIC1.78□□□□□ -2.12
SHC1P29353 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
SHC1P29353 AC074133.1-201ENST00000515696 183 ntBASIC1.78□□□□□ -2.12
SHC1P29353 RNU6-1338P-201ENST00000516328 91 ntBASIC1.78□□□□□ -2.12
SHC1P29353 RNU6-344P-201ENST00000516635 111 ntBASIC1.78□□□□□ -2.12
SHC1P29353 RNU1-117P-201ENST00000517041 158 ntBASIC1.78□□□□□ -2.12
SHC1P29353 CYCSP23-201ENST00000519781 313 ntBASIC1.78□□□□□ -2.12
SHC1P29353 CYCSP26-201ENST00000534107 320 ntBASIC1.78□□□□□ -2.12
SHC1P29353 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.78□□□□□ -2.12
SHC1P29353 AC026470.2-201ENST00000561492 181 ntBASIC1.78□□□□□ -2.12
SHC1P29353 AL355297.2-201ENST00000604792 129 ntBASIC1.78□□□□□ -2.12
SHC1P29353 AC090425.1-201ENST00000610007 140 ntBASIC1.78□□□□□ -2.12
SHC1P29353 AC004467.1-201ENST00000615678 330 ntBASIC1.78□□□□□ -2.12
SHC1P29353 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SHC1P29353 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
SHC1P29353 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
SHC1P29353 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.77□□□□□ -2.13
SHC1P29353 AL391987.6-201ENST00000305671 199 ntBASIC1.77□□□□□ -2.13
SHC1P29353 SNORD114-1-201ENST00000362705 72 ntBASIC1.77□□□□□ -2.13
SHC1P29353 SNORD81.1-201ENST00000363064 77 ntBASIC1.77□□□□□ -2.13
SHC1P29353 RNU5F-3P-201ENST00000363767 117 ntBASIC1.77□□□□□ -2.13
SHC1P29353 RNU6-454P-201ENST00000364292 107 ntBASIC1.77□□□□□ -2.13
SHC1P29353 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SHC1P29353 MIR320B2-201ENST00000408479 138 ntBASIC1.77□□□□□ -2.13
SHC1P29353 RNU6-1199P-201ENST00000411249 104 ntBASIC1.77□□□□□ -2.13
SHC1P29353 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.77□□□□□ -2.13
SHC1P29353 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.77□□□□□ -2.13
SHC1P29353 UBL5P3-201ENST00000475112 231 ntBASIC1.77□□□□□ -2.13
SHC1P29353 RPS23P5-201ENST00000495419 428 ntBASIC1.77□□□□□ -2.13
SHC1P29353 HMGB3P17-201ENST00000504195 649 ntBASIC1.77□□□□□ -2.13
SHC1P29353 SEPT14P8-201ENST00000508026 178 ntBASIC1.77□□□□□ -2.13
SHC1P29353 ATP5EP1-201ENST00000510257 156 ntBASIC1.77□□□□□ -2.13
SHC1P29353 Y_RNA.673-201ENST00000516306 88 ntBASIC1.77□□□□□ -2.13
SHC1P29353 RNU6-965P-201ENST00000516721 96 ntBASIC1.77□□□□□ -2.13
SHC1P29353 RNU7-110P-201ENST00000516891 62 ntBASIC1.77□□□□□ -2.13
SHC1P29353 SCARNA24.2-201ENST00000516968 130 ntBASIC1.77□□□□□ -2.13
SHC1P29353 RNU6-586P-201ENST00000517265 104 ntBASIC1.77□□□□□ -2.13
SHC1P29353 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.77□□□□□ -2.13
SHC1P29353 AC005176.2-201ENST00000596933 147 ntBASIC1.77□□□□□ -2.13
SHC1P29353 AC011373.1-201ENST00000607270 237 ntBASIC1.77□□□□□ -2.13
SHC1P29353 SDR42E1P4-201ENST00000620894 481 ntBASIC1.77□□□□□ -2.13
SHC1P29353 AC091932.3-201ENST00000624223 323 ntBASIC1.77□□□□□ -2.13
SHC1P29353 MIR1248-201ENST00000629190 106 ntBASIC1.77□□□□□ -2.13
SHC1P29353 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SHC1P29353 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
SHC1P29353 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.77□□□□□ -2.13
SHC1P29353 AC009487.4-201ENST00000624969 3585 ntBASIC1.77□□□□□ -2.13
SHC1P29353 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SHC1P29353 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.76□□□□□ -2.13
SHC1P29353 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SHC1P29353 RNU6-545P-201ENST00000362681 104 ntBASIC1.76□□□□□ -2.13
SHC1P29353 Y_RNA.230-201ENST00000364348 109 ntBASIC1.76□□□□□ -2.13
SHC1P29353 Y_RNA.446-201ENST00000384178 104 ntBASIC1.76□□□□□ -2.13
SHC1P29353 Y_RNA.476-201ENST00000384347 108 ntBASIC1.76□□□□□ -2.13
SHC1P29353 MIR95-201ENST00000385072 81 ntBASIC1.76□□□□□ -2.13
SHC1P29353 MIR548B-201ENST00000385247 97 ntBASIC1.76□□□□□ -2.13
SHC1P29353 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms