Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
PTPREP23469 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPREP23469 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPREP23469 Y_RNA.242-201ENST00000364473 110 ntBASIC4.42□□□□□ -1.7
PTPREP23469 RNU1-89P-201ENST00000384592 164 ntBASIC4.42□□□□□ -1.7
PTPREP23469 MIR491-201ENST00000384877 84 ntBASIC4.42□□□□□ -1.7
PTPREP23469 MIR199A2-201ENST00000385289 110 ntBASIC4.42□□□□□ -1.7
PTPREP23469 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTPREP23469 AC233266.1-201ENST00000454518 96 ntBASIC4.42□□□□□ -1.7
PTPREP23469 AC010401.1-201ENST00000463867 348 ntBASIC4.42□□□□□ -1.7
PTPREP23469 S100A11P1-201ENST00000477525 312 ntBASIC4.42□□□□□ -1.7
PTPREP23469 MIR3200-201ENST00000580767 85 ntBASIC4.42□□□□□ -1.7
PTPREP23469 AC242852.1-201ENST00000612151 96 ntBASIC4.42□□□□□ -1.7
PTPREP23469 MIR486-1-201ENST00000612171 68 ntBASIC4.42□□□□□ -1.7
PTPREP23469 AC244015.1-201ENST00000622301 99 ntBASIC4.42□□□□□ -1.7
PTPREP23469 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
PTPREP23469 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPREP23469 RNU1-72P-201ENST00000362976 153 ntBASIC4.41□□□□□ -1.7
PTPREP23469 RNA5SP322-201ENST00000363617 119 ntBASIC4.41□□□□□ -1.7
PTPREP23469 Y_RNA.155-201ENST00000363632 101 ntBASIC4.41□□□□□ -1.7
PTPREP23469 RNA5SP72-201ENST00000364442 117 ntBASIC4.41□□□□□ -1.7
PTPREP23469 RNA5SP167-201ENST00000365461 116 ntBASIC4.41□□□□□ -1.7
PTPREP23469 Y_RNA.360-201ENST00000365512 102 ntBASIC4.41□□□□□ -1.7
PTPREP23469 Y_RNA.454-201ENST00000384224 113 ntBASIC4.41□□□□□ -1.7
PTPREP23469 HMGN2P8-201ENST00000391458 268 ntBASIC4.41□□□□□ -1.7
PTPREP23469 MIR548O-201ENST00000408583 114 ntBASIC4.41□□□□□ -1.7
PTPREP23469 SNORA74D-201ENST00000516404 141 ntBASIC4.41□□□□□ -1.7
PTPREP23469 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPREP23469 AC244505.7-201ENST00000599675 272 ntBASIC4.41□□□□□ -1.7
PTPREP23469 AC073413.2-201ENST00000604332 360 ntBASIC4.41□□□□□ -1.7
PTPREP23469 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPREP23469 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPREP23469 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPREP23469 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PTPREP23469 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PTPREP23469 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.4□□□□□ -1.7
PTPREP23469 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPREP23469 RNU6-60P-201ENST00000364792 103 ntBASIC4.4□□□□□ -1.71
PTPREP23469 Y_RNA.426-201ENST00000384068 113 ntBASIC4.4□□□□□ -1.71
PTPREP23469 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PTPREP23469 RNU6-733P-201ENST00000410759 104 ntBASIC4.4□□□□□ -1.71
PTPREP23469 AC097463.2-201ENST00000421074 142 ntBASIC4.4□□□□□ -1.71
PTPREP23469 RNU7-23P-201ENST00000459465 62 ntBASIC4.4□□□□□ -1.71
PTPREP23469 AP002884.2-201ENST00000471647 395 ntBASIC4.4□□□□□ -1.71
PTPREP23469 SNORA70.24-201ENST00000517233 118 ntBASIC4.4□□□□□ -1.71
PTPREP23469 MIR3618-201ENST00000580330 88 ntBASIC4.4□□□□□ -1.71
PTPREP23469 uc_338.14-201ENST00000613162 166 ntBASIC4.4□□□□□ -1.71
PTPREP23469 MIR7975-201ENST00000619350 68 ntBASIC4.4□□□□□ -1.71
PTPREP23469 AC087741.2-201ENST00000619415 172 ntBASIC4.4□□□□□ -1.71
PTPREP23469 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
PTPREP23469 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTPREP23469 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPREP23469 ZNF271P-202ENST00000465539 1970 ntBASIC4.4□□□□□ -1.71
PTPREP23469 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPREP23469 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPREP23469 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PTPREP23469 RNA5SP51-201ENST00000364750 119 ntBASIC4.39□□□□□ -1.71
PTPREP23469 RNU6-438P-201ENST00000365561 103 ntBASIC4.39□□□□□ -1.71
PTPREP23469 RNU2-11P-201ENST00000459191 187 ntBASIC4.39□□□□□ -1.71
PTPREP23469 AP000873.1-201ENST00000463987 400 ntBASIC4.39□□□□□ -1.71
PTPREP23469 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPREP23469 RN7SKP18-201ENST00000516005 275 ntBASIC4.39□□□□□ -1.71
PTPREP23469 RNU2-34P-201ENST00000516534 121 ntBASIC4.39□□□□□ -1.71
PTPREP23469 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPREP23469 MIR3683-201ENST00000580847 82 ntBASIC4.39□□□□□ -1.71
PTPREP23469 MIR4777-201ENST00000583710 86 ntBASIC4.39□□□□□ -1.71
PTPREP23469 AC087685.1-201ENST00000587507 141 ntBASIC4.39□□□□□ -1.71
PTPREP23469 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPREP23469 AC090115.4-201ENST00000609970 188 ntBASIC4.39□□□□□ -1.71
PTPREP23469 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.39□□□□□ -1.71
PTPREP23469 MIR1255B1-201ENST00000636325 63 ntBASIC4.39□□□□□ -1.71
PTPREP23469 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPREP23469 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPREP23469 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPREP23469 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPREP23469 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PTPREP23469 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPREP23469 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPREP23469 AP003122.5-201ENST00000527668 3766 ntBASIC4.38□□□□□ -1.71
PTPREP23469 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPREP23469 SNORA31-201ENST00000362607 130 ntBASIC4.38□□□□□ -1.71
PTPREP23469 RNU6-198P-201ENST00000384258 104 ntBASIC4.38□□□□□ -1.71
PTPREP23469 RN7SL93P-201ENST00000463035 293 ntBASIC4.38□□□□□ -1.71
PTPREP23469 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPREP23469 RNU6-1291P-201ENST00000516591 104 ntBASIC4.38□□□□□ -1.71
PTPREP23469 AC022695.1-201ENST00000522089 237 ntBASIC4.38□□□□□ -1.71
PTPREP23469 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTPREP23469 AC091304.10-201ENST00000641554 121 ntBASIC4.38□□□□□ -1.71
PTPREP23469 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPREP23469 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPREP23469 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPREP23469 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPREP23469 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPREP23469 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPREP23469 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPREP23469 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPREP23469 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPREP23469 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPREP23469 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPREP23469 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms