Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 Y_RNA.105-201ENST00000363182 111 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 RNU6-454P-201ENST00000364292 107 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 RNU6-1164P-201ENST00000364428 107 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 SNORA40.19-201ENST00000390846 128 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 RNU6-1109P-201ENST00000391187 107 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 AL355497.1-201ENST00000406262 551 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 RNA5SP450-201ENST00000411206 102 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.1□□□□□ -2.07
CTPS1P17812 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CTPS1P17812 AC008134.1-201ENST00000420943 193 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.1□□□□□ -2.07
CTPS1P17812 BX510359.4-201ENST00000423750 193 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 AL731563.1-201ENST00000442202 214 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.1□□□□□ -2.07
CTPS1P17812 RNU1-131P-201ENST00000458943 161 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 AC025465.3-201ENST00000510570 311 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 RNU7-110P-201ENST00000516891 62 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 MIR4648-201ENST00000580107 72 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 MIR5002-201ENST00000584713 97 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 AL162730.1-201ENST00000605734 292 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 Y_RNA.783-201ENST00000613546 102 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 AL590240.4-201ENST00000616908 390 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 AC006001.4-201ENST00000622243 395 ntBASIC2.1□□□□□ -2.07
CTPS1P17812 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CTPS1P17812 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CTPS1P17812 Y_RNA.26-201ENST00000362539 101 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 Y_RNA.101-201ENST00000363154 102 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 Y_RNA.149-201ENST00000363558 117 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 SNORD114-6-201ENST00000364393 72 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 RNU6-806P-201ENST00000365147 105 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 RNU6-21P-201ENST00000384710 107 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 RNU6-713P-201ENST00000384761 107 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 Y_RNA.574-201ENST00000384766 95 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 MIR1283-2-201ENST00000408621 87 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 RNU6-121P-201ENST00000410525 99 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 LINC01399-202ENST00000458450 244 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.09□□□□□ -2.07
CTPS1P17812 RNU2-12P-201ENST00000517216 168 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 AC025647.1-201ENST00000517879 253 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.09□□□□□ -2.07
CTPS1P17812 AC011373.1-201ENST00000607270 237 ntBASIC2.09□□□□□ -2.07
CTPS1P17812 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CTPS1P17812 AP006437.1-201ENST00000641440 3685 ntBASIC2.09□□□□□ -2.08
CTPS1P17812 AL159152.1-201ENST00000635019 2587 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CTPS1P17812 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.08□□□□□ -2.08
CTPS1P17812 Y_RNA.64-201ENST00000362845 102 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 RNU6-23P-201ENST00000363283 107 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 RNU6-238P-201ENST00000363313 106 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 Y_RNA.176-201ENST00000363815 109 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.08□□□□□ -2.08
CTPS1P17812 SNORD115-46-201ENST00000390982 71 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 RNU2-54P-201ENST00000410299 190 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 AL139156.1-201ENST00000412785 841 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 DYNLT3P2-201ENST00000442517 295 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.08□□□□□ -2.08
CTPS1P17812 AC005042.3-201ENST00000453230 174 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 RNU6-155P-201ENST00000516347 100 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 MIR3684-201ENST00000579779 74 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 AC078899.2-201ENST00000595282 212 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 AC006380.1-201ENST00000603598 186 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 AC022441.3-201ENST00000605737 136 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
CTPS1P17812 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CTPS1P17812 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CTPS1P17812 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
CTPS1P17812 RNU1-58P-201ENST00000362413 163 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 Y_RNA.133-201ENST00000363428 110 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 SNORD113-8-201ENST00000363497 74 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 RNA5SP493-201ENST00000364115 91 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 Y_RNA.331-201ENST00000365267 102 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 Y_RNA.446-201ENST00000384178 104 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 RNU4-30P-201ENST00000410245 143 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 AC016909.1-201ENST00000415916 166 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.07□□□□□ -2.08
CTPS1P17812 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.07□□□□□ -2.08
CTPS1P17812 AC096920.1-201ENST00000423991 241 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 MTND3P2-201ENST00000438452 342 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 AP003733.2-201ENST00000529409 171 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.07□□□□□ -2.08
CTPS1P17812 MIR3169-201ENST00000578032 83 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.07□□□□□ -2.08
CTPS1P17812 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.07□□□□□ -2.08
CTPS1P17812 MIR219B-201ENST00000637023 88 ntBASIC2.07□□□□□ -2.08
CTPS1P17812 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CTPS1P17812 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
CTPS1P17812 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CTPS1P17812 Y_RNA.47-201ENST00000362697 108 ntBASIC2.06□□□□□ -2.08
CTPS1P17812 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
CTPS1P17812 RNU6-1240P-201ENST00000365155 104 ntBASIC2.06□□□□□ -2.08
CTPS1P17812 Y_RNA.512-201ENST00000384518 102 ntBASIC2.06□□□□□ -2.08
CTPS1P17812 MIR1261-201ENST00000408659 82 ntBASIC2.06□□□□□ -2.08
CTPS1P17812 Y_RNA.602-201ENST00000410535 92 ntBASIC2.06□□□□□ -2.08
CTPS1P17812 RPL23AP36-201ENST00000413895 458 ntBASIC2.06□□□□□ -2.08
CTPS1P17812 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms