Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-1048P-201ENST00000364054 107 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 RNU1-109P-201ENST00000383960 147 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 SNORD14D-201ENST00000384390 87 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 MIR526A2-201ENST00000390198 65 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 RNU2-48P-201ENST00000410694 191 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 AC008134.1-201ENST00000420943 193 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.91□□□□□ -1.94
COL6A2P12110 MTCO1P44-201ENST00000441935 243 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.91□□□□□ -1.94
COL6A2P12110 RPS20P10-201ENST00000451209 253 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.91□□□□□ -1.94
COL6A2P12110 RNU6-965P-201ENST00000516721 96 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
COL6A2P12110 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL6A2P12110 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.91□□□□□ -1.94
COL6A2P12110 AL161431.1-201ENST00000618966 4205 ntBASIC2.9□□□□□ -1.94
COL6A2P12110 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL6A2P12110 Y_RNA.172-201ENST00000363765 102 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 Y_RNA.332-201ENST00000365271 113 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL6A2P12110 RNU6-418P-201ENST00000384035 107 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 Y_RNA.580-201ENST00000391004 95 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 AL590004.2-201ENST00000404787 371 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 RNU2-2P-201ENST00000410396 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 RNU2-63P-201ENST00000410792 194 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 AC003685.2-201ENST00000422795 395 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 CR769767.1-201ENST00000436337 346 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.9□□□□□ -1.95
COL6A2P12110 RPS26P55-201ENST00000471178 356 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 RPS27AP9-201ENST00000477681 438 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 AL049873.1-201ENST00000480540 376 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 AC005840.1-201ENST00000498412 377 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 AC093259.1-201ENST00000509755 300 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.9□□□□□ -1.95
COL6A2P12110 RN7SKP164-201ENST00000516138 266 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 RNA5SP490-201ENST00000517141 136 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 MIR5004-201ENST00000579078 107 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 RNU2-4P-201ENST00000606190 192 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.15-201ENST00000611544 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.16-201ENST00000613119 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.12-201ENST00000613778 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 Y_RNA.802-201ENST00000614892 130 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.9-201ENST00000615427 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.11-201ENST00000616345 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.2-201ENST00000616535 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.3-201ENST00000617785 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.19-201ENST00000618602 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 RNU2-1-201ENST00000618664 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.6-201ENST00000619225 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.5-201ENST00000619465 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 U2.10-201ENST00000620268 191 ntBASIC2.9□□□□□ -1.95
COL6A2P12110 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL6A2P12110 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL6A2P12110 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
COL6A2P12110 RNU1-23P-201ENST00000363361 144 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 RNU6-103P-201ENST00000363686 107 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 SNORA9.2-201ENST00000365361 133 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 SNORA54-201ENST00000384281 123 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 MIR128-1-201ENST00000384921 82 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.89□□□□□ -1.95
COL6A2P12110 AC123900.1-201ENST00000420390 96 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 AL357134.1-201ENST00000445848 426 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 AL137159.1-201ENST00000452808 512 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 AP001486.1-201ENST00000463339 476 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 RN7SL504P-201ENST00000494496 287 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 CKS1BP2-201ENST00000497342 240 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.89□□□□□ -1.95
COL6A2P12110 RNU7-200P-201ENST00000516105 62 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 RNU6-1337P-201ENST00000516525 95 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 PRELID2P1-201ENST00000552837 301 ntBASIC2.89□□□□□ -1.95
COL6A2P12110 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.89□□□□□ -1.95
COL6A2P12110 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
COL6A2P12110 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.88□□□□□ -1.95
COL6A2P12110 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL6A2P12110 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL6A2P12110 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL6A2P12110 RNU6-1205P-201ENST00000363625 106 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 Y_RNA.293-201ENST00000364908 93 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 U8.7-201ENST00000364940 136 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 RNU6-1240P-201ENST00000365155 104 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 Y_RNA.412-201ENST00000384001 104 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 RNU6-1323P-201ENST00000384025 107 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 RNU6-187P-201ENST00000384139 106 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 RNU6-804P-201ENST00000384286 107 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 MIR512-1-201ENST00000384913 84 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 MIR561-201ENST00000385216 97 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
COL6A2P12110 RNU6-220P-201ENST00000390919 107 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 RNU5E-9P-201ENST00000411164 104 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 AC010154.1-201ENST00000425857 269 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.88□□□□□ -1.95
COL6A2P12110 AC010531.2-201ENST00000465012 153 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.88□□□□□ -1.95
COL6A2P12110 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.88□□□□□ -1.95
COL6A2P12110 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.88□□□□□ -1.95
COL6A2P12110 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 RNU7-115P-201ENST00000516433 55 ntBASIC2.88□□□□□ -1.95
COL6A2P12110 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms