Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC091178.2-201ENST00000584401 117 ntBASIC3.54□□□□□ -1.84
RARAP10276 AC104984.5-201ENST00000586878 94 ntBASIC3.54□□□□□ -1.84
RARAP10276 SCARNA17.4-201ENST00000614296 143 ntBASIC3.54□□□□□ -1.84
RARAP10276 MIR4679-1-201ENST00000637619 75 ntBASIC3.54□□□□□ -1.84
RARAP10276 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RARAP10276 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RARAP10276 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.54□□□□□ -1.84
RARAP10276 AL161912.2-201ENST00000565707 3007 ntBASIC3.54□□□□□ -1.84
RARAP10276 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RARAP10276 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
RARAP10276 RNU1-22P-201ENST00000363334 158 ntBASIC3.53□□□□□ -1.84
RARAP10276 Y_RNA.796-201ENST00000364268 102 ntBASIC3.53□□□□□ -1.84
RARAP10276 RNU6-1164P-201ENST00000364428 107 ntBASIC3.53□□□□□ -1.84
RARAP10276 Y_RNA.799-201ENST00000364992 102 ntBASIC3.53□□□□□ -1.84
RARAP10276 Y_RNA.309-201ENST00000365046 111 ntBASIC3.53□□□□□ -1.84
RARAP10276 SNORD18B-201ENST00000365659 72 ntBASIC3.53□□□□□ -1.84
RARAP10276 MIR548A3-201ENST00000385297 97 ntBASIC3.53□□□□□ -1.84
RARAP10276 RNA5SP354-201ENST00000391247 136 ntBASIC3.53□□□□□ -1.84
RARAP10276 RN7SKP111-201ENST00000410349 271 ntBASIC3.53□□□□□ -1.84
RARAP10276 GOT2P5-201ENST00000433995 546 ntBASIC3.53□□□□□ -1.84
RARAP10276 SNRPGP3-201ENST00000469405 227 ntBASIC3.53□□□□□ -1.84
RARAP10276 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.53□□□□□ -1.84
RARAP10276 SNORA64.4-201ENST00000516632 81 ntBASIC3.53□□□□□ -1.84
RARAP10276 MIR3200-201ENST00000580767 85 ntBASIC3.53□□□□□ -1.84
RARAP10276 AC012531.5-201ENST00000611375 151 ntBASIC3.53□□□□□ -1.84
RARAP10276 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.53□□□□□ -1.84
RARAP10276 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RARAP10276 AL356274.2-201ENST00000624379 3752 ntBASIC3.53□□□□□ -1.84
RARAP10276 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
RARAP10276 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.53□□□□□ -1.85
RARAP10276 Y_RNA.35-201ENST00000362601 101 ntBASIC3.52□□□□□ -1.85
RARAP10276 SNORD56.3-201ENST00000363507 71 ntBASIC3.52□□□□□ -1.85
RARAP10276 RNU6-309P-201ENST00000364573 106 ntBASIC3.52□□□□□ -1.85
RARAP10276 MIR562-201ENST00000384894 95 ntBASIC3.52□□□□□ -1.85
RARAP10276 MIR7-3-201ENST00000384898 110 ntBASIC3.52□□□□□ -1.85
RARAP10276 SNORA26-201ENST00000391286 122 ntBASIC3.52□□□□□ -1.85
RARAP10276 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.52□□□□□ -1.85
RARAP10276 RNA5SP89-201ENST00000410300 108 ntBASIC3.52□□□□□ -1.85
RARAP10276 AC063976.3-201ENST00000426849 329 ntBASIC3.52□□□□□ -1.85
RARAP10276 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.52□□□□□ -1.85
RARAP10276 AC097462.1-201ENST00000514125 324 ntBASIC3.52□□□□□ -1.85
RARAP10276 RNU6-781P-201ENST00000516377 101 ntBASIC3.52□□□□□ -1.85
RARAP10276 RNU6-586P-201ENST00000517265 104 ntBASIC3.52□□□□□ -1.85
RARAP10276 NDUFA5P6-201ENST00000542110 379 ntBASIC3.52□□□□□ -1.85
RARAP10276 MIR3117-201ENST00000584034 78 ntBASIC3.52□□□□□ -1.85
RARAP10276 AC004832.5-201ENST00000608677 401 ntBASIC3.52□□□□□ -1.85
RARAP10276 AC090115.4-201ENST00000609970 188 ntBASIC3.52□□□□□ -1.85
RARAP10276 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.52□□□□□ -1.85
RARAP10276 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.52□□□□□ -1.85
RARAP10276 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.52□□□□□ -1.85
RARAP10276 AC017071.1-201ENST00000564407 2204 ntBASIC3.52□□□□□ -1.85
RARAP10276 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RARAP10276 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RARAP10276 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.51□□□□□ -1.85
RARAP10276 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.51□□□□□ -1.85
RARAP10276 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RARAP10276 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
RARAP10276 RNU6-1209P-201ENST00000363655 107 ntBASIC3.51□□□□□ -1.85
RARAP10276 RNU6-438P-201ENST00000365561 103 ntBASIC3.51□□□□□ -1.85
RARAP10276 MIR218-2-201ENST00000385006 110 ntBASIC3.51□□□□□ -1.85
RARAP10276 RPL21P10-201ENST00000463521 490 ntBASIC3.51□□□□□ -1.85
RARAP10276 RNU2-34P-201ENST00000516534 121 ntBASIC3.51□□□□□ -1.85
RARAP10276 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RARAP10276 MIR4438-201ENST00000585271 93 ntBASIC3.51□□□□□ -1.85
RARAP10276 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RARAP10276 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RARAP10276 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RARAP10276 AC093010.3-201ENST00000570269 15214 ntBASIC3.5□□□□□ -1.85
RARAP10276 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.5□□□□□ -1.85
RARAP10276 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
RARAP10276 Y_RNA.52-201ENST00000362760 96 ntBASIC3.5□□□□□ -1.85
RARAP10276 RNA5SP383-201ENST00000362934 120 ntBASIC3.5□□□□□ -1.85
RARAP10276 MIRLET7F2-201ENST00000385277 83 ntBASIC3.5□□□□□ -1.85
RARAP10276 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RARAP10276 RN7SKP284-201ENST00000411002 343 ntBASIC3.5□□□□□ -1.85
RARAP10276 RPS29P4-201ENST00000414733 161 ntBASIC3.5□□□□□ -1.85
RARAP10276 RNU6-168P-201ENST00000516189 101 ntBASIC3.5□□□□□ -1.85
RARAP10276 RNU7-149P-201ENST00000516739 59 ntBASIC3.5□□□□□ -1.85
RARAP10276 RNU7-172P-201ENST00000517125 64 ntBASIC3.5□□□□□ -1.85
RARAP10276 RNA5SP380-201ENST00000517190 98 ntBASIC3.5□□□□□ -1.85
RARAP10276 AC011604.1-201ENST00000545978 196 ntBASIC3.5□□□□□ -1.85
RARAP10276 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.5□□□□□ -1.85
RARAP10276 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.5□□□□□ -1.85
RARAP10276 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.5□□□□□ -1.85
RARAP10276 AL121890.5-201ENST00000620848 304 ntBASIC3.5□□□□□ -1.85
RARAP10276 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RARAP10276 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RARAP10276 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.5□□□□□ -1.85
RARAP10276 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RARAP10276 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RARAP10276 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RARAP10276 RNU6-1138P-201ENST00000365359 106 ntBASIC3.49□□□□□ -1.85
RARAP10276 MIR624-201ENST00000385217 97 ntBASIC3.49□□□□□ -1.85
RARAP10276 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RARAP10276 Y_RNA.651-201ENST00000459380 103 ntBASIC3.49□□□□□ -1.85
RARAP10276 MRPS36P2-201ENST00000512569 299 ntBASIC3.49□□□□□ -1.85
RARAP10276 RN7SKP19-201ENST00000516016 252 ntBASIC3.49□□□□□ -1.85
RARAP10276 SNORA18.4-201ENST00000516440 124 ntBASIC3.49□□□□□ -1.85
RARAP10276 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.49□□□□□ -1.85
RARAP10276 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms