Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SOX1O00570 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.46□□□□□ -1.86
SOX1O00570 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
SOX1O00570 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SOX1O00570 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
SOX1O00570 RNU6-235P-201ENST00000362644 107 ntBASIC3.45□□□□□ -1.86
SOX1O00570 RNU4-13P-201ENST00000364019 141 ntBASIC3.45□□□□□ -1.86
SOX1O00570 RNU6-484P-201ENST00000384016 107 ntBASIC3.45□□□□□ -1.86
SOX1O00570 MIR181A2-201ENST00000384863 110 ntBASIC3.45□□□□□ -1.86
SOX1O00570 RNA5SP511-201ENST00000410487 115 ntBASIC3.45□□□□□ -1.86
SOX1O00570 RN7SKP220-201ENST00000410611 288 ntBASIC3.45□□□□□ -1.86
SOX1O00570 AL158823.1-201ENST00000418441 478 ntBASIC3.45□□□□□ -1.86
SOX1O00570 AC022018.1-201ENST00000430685 241 ntBASIC3.45□□□□□ -1.86
SOX1O00570 AC016717.1-201ENST00000448918 286 ntBASIC3.45□□□□□ -1.86
SOX1O00570 AC083906.5-201ENST00000503722 328 ntBASIC3.45□□□□□ -1.86
SOX1O00570 Y_RNA.709-201ENST00000516952 92 ntBASIC3.45□□□□□ -1.86
SOX1O00570 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SOX1O00570 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SOX1O00570 SNORA63.4-201ENST00000362763 126 ntBASIC3.44□□□□□ -1.86
SOX1O00570 RNU6-486P-201ENST00000363116 107 ntBASIC3.44□□□□□ -1.86
SOX1O00570 RNU6-978P-201ENST00000364371 103 ntBASIC3.44□□□□□ -1.86
SOX1O00570 Y_RNA.294-201ENST00000364916 102 ntBASIC3.44□□□□□ -1.86
SOX1O00570 SNORA72-201ENST00000384339 132 ntBASIC3.44□□□□□ -1.86
SOX1O00570 AC025647.1-201ENST00000517879 253 ntBASIC3.44□□□□□ -1.86
SOX1O00570 AC015712.3-201ENST00000559380 164 ntBASIC3.44□□□□□ -1.86
SOX1O00570 MIR3121-201ENST00000579680 77 ntBASIC3.44□□□□□ -1.86
SOX1O00570 MIR2681-201ENST00000581814 105 ntBASIC3.44□□□□□ -1.86
SOX1O00570 AL049861.1-201ENST00000603130 150 ntBASIC3.44□□□□□ -1.86
SOX1O00570 AC012531.5-201ENST00000611375 151 ntBASIC3.44□□□□□ -1.86
SOX1O00570 MIR3914-2-201ENST00000637339 95 ntBASIC3.44□□□□□ -1.86
SOX1O00570 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SOX1O00570 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX1O00570 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX1O00570 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX1O00570 RNU1-70P-201ENST00000362618 164 ntBASIC3.43□□□□□ -1.86
SOX1O00570 RNA5SP295-201ENST00000362655 121 ntBASIC3.43□□□□□ -1.86
SOX1O00570 Y_RNA.120-201ENST00000363304 110 ntBASIC3.43□□□□□ -1.86
SOX1O00570 RNU6-1083P-201ENST00000384022 107 ntBASIC3.43□□□□□ -1.86
SOX1O00570 AC008134.1-201ENST00000420943 193 ntBASIC3.43□□□□□ -1.86
SOX1O00570 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX1O00570 AC023449.1-201ENST00000454464 154 ntBASIC3.43□□□□□ -1.86
SOX1O00570 CYCTP-201ENST00000504253 315 ntBASIC3.43□□□□□ -1.86
SOX1O00570 ATP5EP1-201ENST00000510257 156 ntBASIC3.43□□□□□ -1.86
SOX1O00570 RNA5SP153-201ENST00000516498 76 ntBASIC3.43□□□□□ -1.86
SOX1O00570 AC015720.1-201ENST00000565251 277 ntBASIC3.43□□□□□ -1.86
SOX1O00570 MIR486-1-201ENST00000612171 68 ntBASIC3.43□□□□□ -1.86
SOX1O00570 U6.95-201ENST00000636931 70 ntBASIC3.43□□□□□ -1.86
SOX1O00570 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SOX1O00570 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX1O00570 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX1O00570 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX1O00570 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX1O00570 RNU6-944P-201ENST00000364023 107 ntBASIC3.42□□□□□ -1.86
SOX1O00570 RNU6-117P-201ENST00000365415 107 ntBASIC3.42□□□□□ -1.86
SOX1O00570 RNU6-1336P-201ENST00000383886 109 ntBASIC3.42□□□□□ -1.86
SOX1O00570 RNU6-1274P-201ENST00000384557 107 ntBASIC3.42□□□□□ -1.86
SOX1O00570 RNU6-1235P-201ENST00000384559 107 ntBASIC3.42□□□□□ -1.86
SOX1O00570 RNU1-89P-201ENST00000384592 164 ntBASIC3.42□□□□□ -1.86
SOX1O00570 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.42□□□□□ -1.86
SOX1O00570 AC063976.3-201ENST00000426849 329 ntBASIC3.42□□□□□ -1.86
SOX1O00570 AL158147.1-201ENST00000443970 75 ntBASIC3.42□□□□□ -1.86
SOX1O00570 RNU6-498P-201ENST00000459468 107 ntBASIC3.42□□□□□ -1.86
SOX1O00570 SNRPGP3-201ENST00000469405 227 ntBASIC3.42□□□□□ -1.86
SOX1O00570 RNU6-548P-201ENST00000517083 115 ntBASIC3.42□□□□□ -1.86
SOX1O00570 AC107934.2-201ENST00000518653 310 ntBASIC3.42□□□□□ -1.86
SOX1O00570 MTND5P34-201ENST00000568888 325 ntBASIC3.42□□□□□ -1.86
SOX1O00570 MIR5047-201ENST00000579212 100 ntBASIC3.42□□□□□ -1.86
SOX1O00570 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.42□□□□□ -1.86
SOX1O00570 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.41□□□□□ -1.86
SOX1O00570 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SOX1O00570 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX1O00570 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SOX1O00570 AC138915.1-201ENST00000565427 1685 ntBASIC3.41□□□□□ -1.86
SOX1O00570 U8.1-201ENST00000362843 134 ntBASIC3.41□□□□□ -1.86
SOX1O00570 RNU6-1240P-201ENST00000365155 104 ntBASIC3.41□□□□□ -1.86
SOX1O00570 SNORD6-201ENST00000365444 73 ntBASIC3.41□□□□□ -1.86
SOX1O00570 DYNLT3P1-201ENST00000378574 347 ntBASIC3.41□□□□□ -1.86
SOX1O00570 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.41□□□□□ -1.86
SOX1O00570 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.41□□□□□ -1.86
SOX1O00570 AC016925.1-201ENST00000458303 298 ntBASIC3.41□□□□□ -1.86
SOX1O00570 AC090515.1-201ENST00000465295 476 ntBASIC3.41□□□□□ -1.86
SOX1O00570 SNORA70.14-201ENST00000516205 110 ntBASIC3.41□□□□□ -1.86
SOX1O00570 RNA5SP24-201ENST00000516478 95 ntBASIC3.41□□□□□ -1.86
SOX1O00570 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.41□□□□□ -1.86
SOX1O00570 AC131055.1-201ENST00000584626 316 ntBASIC3.41□□□□□ -1.86
SOX1O00570 uc_338.4-201ENST00000616635 176 ntBASIC3.41□□□□□ -1.86
SOX1O00570 AC064859.1-201ENST00000624741 174 ntBASIC3.41□□□□□ -1.86
SOX1O00570 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SOX1O00570 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
SOX1O00570 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SOX1O00570 Z82209.1-201ENST00000422141 2135 ntBASIC3.4□□□□□ -1.86
SOX1O00570 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.4□□□□□ -1.86
SOX1O00570 GABRG2-229ENST00000641017 3628 ntBASIC3.4□□□□□ -1.86
SOX1O00570 U8.2-201ENST00000363156 134 ntBASIC3.4□□□□□ -1.87
SOX1O00570 RNA5SP42-201ENST00000364278 115 ntBASIC3.4□□□□□ -1.87
SOX1O00570 RNU6-755P-201ENST00000364400 103 ntBASIC3.4□□□□□ -1.87
SOX1O00570 RNU6-438P-201ENST00000365561 103 ntBASIC3.4□□□□□ -1.87
SOX1O00570 SNORD18B-201ENST00000365659 72 ntBASIC3.4□□□□□ -1.87
SOX1O00570 RNU6-418P-201ENST00000384035 107 ntBASIC3.4□□□□□ -1.87
SOX1O00570 AC009414.1-201ENST00000427200 443 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms