Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 RNU2-32P-201ENST00000411193 191 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 RPL30P13-201ENST00000418873 348 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 AC016717.1-201ENST00000448918 286 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 AL137159.1-201ENST00000452808 512 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 AC010401.1-201ENST00000463867 348 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 AC110741.2-201ENST00000605278 268 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 AC012640.5-201ENST00000623897 319 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 AL137790.1-201ENST00000634283 177 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 AC138915.1-201ENST00000565427 1685 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 AC010332.2-201ENST00000613083 1904 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
UPK3BL1B0FP48 RNU6-1240P-201ENST00000365155 104 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 RNU6-407P-201ENST00000365280 104 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 RNU6-643P-201ENST00000384018 107 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 MIR15B-201ENST00000385045 98 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 RNA5SP496-201ENST00000391240 109 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 RNU6-257P-201ENST00000410238 98 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 RNU4-43P-201ENST00000410628 137 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 HMGN2P18-201ENST00000450680 270 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 AC010531.2-201ENST00000465012 153 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 MIR3646-201ENST00000578301 84 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 AC104984.5-201ENST00000586878 94 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 uc_338.25-201ENST00000613756 156 ntBASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
UPK3BL1B0FP48 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 SNORD50B-201ENST00000364995 70 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 RNU4-11P-201ENST00000365287 132 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 SNORA40-201ENST00000388090 126 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 MIR1278-201ENST00000408753 81 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 RNU6-383P-201ENST00000410864 94 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 AL135786.1-201ENST00000415892 214 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 RPL23AP58-201ENST00000440453 469 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 HMGN1P18-201ENST00000457642 277 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 AC090515.1-201ENST00000465295 476 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 RNU6-313P-201ENST00000516317 112 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 RNA5SP490-201ENST00000517141 136 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 AC023043.3-201ENST00000593113 385 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 MIR1248-201ENST00000629190 106 ntBASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UPK3BL1B0FP48 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 AL356292.1-201ENST00000283110 373 ntBASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 MIR449A-201ENST00000362113 91 ntBASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 RNU6-418P-201ENST00000384035 107 ntBASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 SNORA7.4-201ENST00000384249 137 ntBASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 AC006461.1-201ENST00000412637 326 ntBASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 AC104332.2-201ENST00000429959 156 ntBASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 AL355297.2-201ENST00000604792 129 ntBASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 AC090115.4-201ENST00000609970 188 ntBASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 AC013412.1-201ENST00000610687 192 ntBASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 CENPCP1-201ENST00000533085 2578 ntBASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK3BL1B0FP48 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 AL021368.2-201ENST00000606125 5352 ntBASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 RNU6-117P-201ENST00000365415 107 ntBASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 MIR561-201ENST00000385216 97 ntBASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 RNU6-1168P-201ENST00000390831 104 ntBASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 AL512604.1-201ENST00000404812 257 ntBASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 AL513477.1-202ENST00000417061 214 ntBASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 RNU6-437P-201ENST00000459408 95 ntBASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 MIR622-201ENST00000638396 96 ntBASIC3.18□□□□□ -1.9
UPK3BL1B0FP48 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 RNU6-199P-201ENST00000362954 107 ntBASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 RNU6-1154P-201ENST00000391001 104 ntBASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 AL357134.1-201ENST00000445848 426 ntBASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 RPL23AP54-201ENST00000495129 419 ntBASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 RNU6-561P-201ENST00000516222 102 ntBASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 RNU6-965P-201ENST00000516721 96 ntBASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 MIR5047-201ENST00000579212 100 ntBASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK3BL1B0FP48 AC073476.4-201ENST00000628409 72 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms