Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 RNU6-1323P-201ENST00000384025 107 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 SNORA20B-201ENST00000384220 132 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 SNORD116-13-201ENST00000384408 92 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 AL512604.1-201ENST00000404812 257 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 SNORA79-201ENST00000408376 140 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 HMGN2P9-201ENST00000476875 229 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 CYCTP-201ENST00000504253 315 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 RNU6-1098P-201ENST00000516772 96 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 AC090142.3-201ENST00000519012 385 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 CYCSP26-201ENST00000534107 320 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 AC023043.3-201ENST00000593113 385 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 AL159152.1-201ENST00000635019 2587 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 AC010680.1-201ENST00000590024 3590 ntBASIC3.72□□□□□ -1.81
LOC102724428A0A0B4J2F2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 PWAR6-201ENST00000552334 4618 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 SNORD32B-201ENST00000364460 84 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 MIR196B-201ENST00000384852 84 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 Y_RNA.584-201ENST00000391090 114 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 HMGN1P18-201ENST00000457642 277 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU1-143P-201ENST00000516296 146 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU5F-4P-201ENST00000516581 114 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 AC093331.1-201ENST00000521474 169 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 AC120024.3-201ENST00000603167 156 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 U1.23-201ENST00000610293 146 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 uc_338.14-201ENST00000613162 166 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU1-68P-201ENST00000615382 146 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 U1.39-201ENST00000621562 146 ntBASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LOC102724428A0A0B4J2F2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU6-1298P-201ENST00000362456 101 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU6-235P-201ENST00000362644 107 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 Y_RNA.294-201ENST00000364916 102 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 Y_RNA.587-201ENST00000391210 103 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 AC245047.4-201ENST00000433189 144 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 AL357134.1-201ENST00000445848 426 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU7-57P-201ENST00000459540 60 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 Y_RNA.709-201ENST00000516952 92 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 Y_RNA.757-201ENST00000578934 114 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 AC005972.2-201ENST00000604690 348 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 AL670379.2-201ENST00000604983 252 ntBASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LOC102724428A0A0B4J2F2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 SNORA27.1-201ENST00000362604 124 ntBASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNA5SP496-201ENST00000391240 109 ntBASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNA5SP508-201ENST00000411327 119 ntBASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU6-437P-201ENST00000459408 95 ntBASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 TRBV12-1-201ENST00000479785 344 ntBASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 RPL36AP21-201ENST00000490372 323 ntBASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 RPL23AP54-201ENST00000495129 419 ntBASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU7-116P-201ENST00000516940 62 ntBASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 MIR4425-201ENST00000580572 84 ntBASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LOC102724428A0A0B4J2F2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU6-271P-201ENST00000363858 105 ntBASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 SNORA25.7-201ENST00000364375 127 ntBASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 AL158823.1-201ENST00000418441 478 ntBASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 SNORD65B-201ENST00000459126 73 ntBASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU1-112P-201ENST00000364401 164 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 MIR300-201ENST00000401138 83 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 AC097463.2-201ENST00000421074 142 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 AC010401.1-201ENST00000463867 348 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 RPS26P55-201ENST00000471178 356 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 AC010598.1-201ENST00000510378 103 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 SNORA31.1-201ENST00000515993 133 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU1-41P-201ENST00000516161 162 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 SNORA31.5-201ENST00000516190 133 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU1-48P-201ENST00000516400 162 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 MTND5P34-201ENST00000568888 325 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 AC008739.2-201ENST00000597006 317 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 MIR3914-2-201ENST00000637339 95 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 AC103988.1-201ENST00000566382 2177 ntBASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LOC102724428A0A0B4J2F2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.66□□□□□ -1.82
LOC102724428A0A0B4J2F2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms