Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MIR29C-201ENST00000385231 88 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 RNU2-48P-201ENST00000410694 191 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 AC004866.1-201ENST00000411748 78 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 AC074290.1-201ENST00000448883 135 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 MRPS35P2-201ENST00000508242 191 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 RNU1-117P-201ENST00000517041 158 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 RRN3P3-201ENST00000549207 578 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 PRELID2P1-201ENST00000552837 301 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 AL117187.1-201ENST00000555482 181 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 Y_RNA.210-201ENST00000364161 110 ntBASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 RNU6-438P-201ENST00000365561 103 ntBASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 Y_RNA.498-201ENST00000384460 102 ntBASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 MIR518A2-201ENST00000384966 87 ntBASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 AC114982.1-201ENST00000469402 321 ntBASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 MIR4753-201ENST00000585119 83 ntBASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 PRR13P7-201ENST00000605538 430 ntBASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDK11AQ9UQ88 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 AC005336.3-201ENST00000623833 2679 ntBASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 Y_RNA.183-201ENST00000363882 113 ntBASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 SNORD31B-201ENST00000364977 69 ntBASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 MIR586-201ENST00000385035 97 ntBASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 AL358176.2-201ENST00000425769 204 ntBASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 MIR1248-201ENST00000629190 106 ntBASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 AC008555.8-201ENST00000623602 2168 ntBASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CDK11AQ9UQ88 Y_RNA.415-201ENST00000384012 112 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 RNU6-1310P-201ENST00000384153 107 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 AC019129.1-201ENST00000403786 261 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 SRIP3-201ENST00000413200 219 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 NDUFB4P10-201ENST00000452541 359 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 RNU6-625P-201ENST00000459412 107 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 AC010655.3-201ENST00000478818 450 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 RNA5SP182-201ENST00000516064 82 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 RNU6-397P-201ENST00000516226 104 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 RNU6-1046P-201ENST00000516538 107 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 RNA5SP490-201ENST00000517141 136 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 RAC1P9-201ENST00000604990 392 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 MIR6845-201ENST00000613182 61 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 AC008873.1-201ENST00000625051 138 ntBASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
CDK11AQ9UQ88 Y_RNA.176-201ENST00000363815 109 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 RNU6-1305P-201ENST00000364353 104 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 RNU6-1105P-201ENST00000384774 107 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 MIR1283-1-201ENST00000408494 87 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 PRELID3BP1-201ENST00000457142 540 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 RPS27P21-201ENST00000486977 252 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 RNU6-408P-201ENST00000515910 100 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 RNU6-107P-201ENST00000516643 102 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 RNU6-897P-201ENST00000517135 105 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 AC018448.1-201ENST00000552843 316 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 AC008269.2-201ENST00000561915 1105 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 AC011476.5-201ENST00000615594 130 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 SDR42E1P4-201ENST00000620894 481 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.23□□□□□ -1.89
CDK11AQ9UQ88 RNU6-1309P-201ENST00000363305 108 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 Y_RNA.149-201ENST00000363558 117 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 U3.8-201ENST00000363675 217 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 RNU6-743P-201ENST00000364151 106 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 SNORD14D-201ENST00000384390 87 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 MIR548F4-201ENST00000408515 105 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 U3.40-201ENST00000408706 208 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 HMGN2P18-201ENST00000450680 270 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 MTATP8P1-201ENST00000467115 207 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 RNU6-635P-201ENST00000516651 102 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 AL357075.2-201ENST00000614906 189 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 AC130454.1-201ENST00000622948 401 ntBASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDK11AQ9UQ88 RNU6-545P-201ENST00000362681 104 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.230-201ENST00000364348 109 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 Y_RNA.462-201ENST00000384268 102 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 SNORA67.2-201ENST00000384300 149 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 RNU6-1109P-201ENST00000391187 107 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 RNA5SP450-201ENST00000411206 102 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 MTND3P2-201ENST00000438452 342 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 ATP5EP1-201ENST00000510257 156 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 RNY3P15-201ENST00000516297 97 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDK11AQ9UQ88 RNU6-1264P-201ENST00000383891 107 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms