Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HPS5Q9UPZ3 AL133412.1-201ENST00000380194 2992 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 RNU6-1099P-201ENST00000363533 107 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 RNU6-776P-201ENST00000364403 104 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 RNU6-1022P-201ENST00000365049 104 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 Y_RNA.437-201ENST00000384113 113 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 RNU6-975P-201ENST00000384296 105 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 RNU6-816P-201ENST00000390914 107 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 RNU6-1268P-201ENST00000391214 107 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 RNU6-1239P-201ENST00000391310 107 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 HMGN2P8-201ENST00000391458 268 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 AC005326.1-201ENST00000429197 123 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 HMGN2P21-201ENST00000447764 270 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 AL441985.1-201ENST00000457727 251 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 SUMO2P16-201ENST00000519475 264 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 AC022695.1-201ENST00000522089 237 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 MIR3163-201ENST00000581592 73 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 AC021443.1-201ENST00000604478 211 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 AC010680.1-201ENST00000590024 3590 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 AL035425.3-201ENST00000564206 4996 ntBASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HPS5Q9UPZ3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 AL136964.1-201ENST00000622038 2990 ntBASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 RNU6-349P-201ENST00000362402 107 ntBASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 RNU6-644P-201ENST00000391155 98 ntBASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 RNA5SP239-201ENST00000410218 129 ntBASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 AC096949.1-201ENST00000412047 152 ntBASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 RPL30P4-201ENST00000429309 333 ntBASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 RNU6-162P-201ENST00000516228 103 ntBASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 RNU6-1018P-201ENST00000516577 106 ntBASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 MIR3117-201ENST00000584034 78 ntBASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS5Q9UPZ3 RNU6-1104P-201ENST00000384723 104 ntBASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 AC023141.4-201ENST00000412031 328 ntBASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 ATP5A1P2-201ENST00000412323 255 ntBASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 RPS27P22-201ENST00000478056 241 ntBASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 AC025518.1-201ENST00000479856 347 ntBASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 RNU1-30P-201ENST00000606575 163 ntBASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 MIR486-1-201ENST00000612171 68 ntBASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 AC073308.1-201ENST00000623696 305 ntBASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HPS5Q9UPZ3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 Y_RNA.10-201ENST00000362371 110 ntBASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 RNU1-22P-201ENST00000363334 158 ntBASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 RNU6-944P-201ENST00000364023 107 ntBASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 RNU1-33P-201ENST00000364249 162 ntBASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 RNU1-57P-201ENST00000384491 166 ntBASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 AC004941.2-201ENST00000427009 228 ntBASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 AC084357.1-201ENST00000473404 255 ntBASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 RNU6-693P-201ENST00000516134 107 ntBASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 RN7SKP282-201ENST00000516824 299 ntBASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HPS5Q9UPZ3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HPS5Q9UPZ3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HPS5Q9UPZ3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HPS5Q9UPZ3 RNA5SP322-201ENST00000363617 119 ntBASIC4.4□□□□□ -1.71
HPS5Q9UPZ3 SNORA33-201ENST00000363664 130 ntBASIC4.4□□□□□ -1.71
HPS5Q9UPZ3 RNA5SP126-201ENST00000365092 109 ntBASIC4.4□□□□□ -1.71
HPS5Q9UPZ3 RNU1-89P-201ENST00000384592 164 ntBASIC4.4□□□□□ -1.71
HPS5Q9UPZ3 RNU6-402P-201ENST00000410678 103 ntBASIC4.4□□□□□ -1.71
HPS5Q9UPZ3 AC016717.1-201ENST00000448918 286 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms