Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
FOXD3Q9UJU5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 TNPO1P3-201ENST00000436471 2662 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 RNU1-18P-201ENST00000363062 164 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 RNU1-96P-201ENST00000364163 162 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 Y_RNA.796-201ENST00000364268 102 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 Y_RNA.799-201ENST00000364992 102 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 RNU6-1138P-201ENST00000365359 106 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 MIR562-201ENST00000384894 95 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 MIR218-2-201ENST00000385006 110 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 RN7SL93P-201ENST00000463035 293 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 AC022695.1-201ENST00000522089 237 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 Y_RNA.757-201ENST00000578934 114 ntBASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXD3Q9UJU5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 MIR340-201ENST00000362125 95 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 RNU6-1209P-201ENST00000363655 107 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 RNA5SP387-201ENST00000364226 106 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 AC003685.2-201ENST00000422795 395 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 RPS15AP28-201ENST00000435088 386 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 RN7SKP209-201ENST00000516888 304 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 AC090049.2-201ENST00000550377 109 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 AC007229.1-201ENST00000590455 412 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 MIR7851-201ENST00000610611 160 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 JPX_2.1-201ENST00000614161 69 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXD3Q9UJU5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 snoU2-30.2-201ENST00000362805 70 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 RNY1P11-201ENST00000363759 113 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 Y_RNA.634-201ENST00000364811 113 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 RNA5SP424-201ENST00000390988 115 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 AC060773.1-201ENST00000421698 310 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 HMGN2P34-201ENST00000437647 269 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 AL353689.1-201ENST00000438895 199 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 RPL39P40-201ENST00000445481 146 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 RN7SL601P-201ENST00000471221 293 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 OR9P1P-201ENST00000496431 281 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 RNU6-919P-201ENST00000516731 104 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 RNU6-1096P-201ENST00000517089 102 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 AC007179.3-201ENST00000604976 235 ntBASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
FOXD3Q9UJU5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 Y_RNA.120-201ENST00000363304 110 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 SNORD21-201ENST00000383953 95 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 MIR483-201ENST00000385070 76 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 RNU6-220P-201ENST00000390919 107 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 SRIP3-201ENST00000413200 219 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 AC093578.1-201ENST00000415219 368 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 AC011406.1-201ENST00000512440 370 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 RNU7-99P-201ENST00000516271 62 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 AC131055.1-201ENST00000584626 316 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 AL353149.1-201ENST00000610667 244 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 SNORA50A-202ENST00000629536 136 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 AC073346.2-201ENST00000624724 2058 ntBASIC3.31□□□□□ -1.88
FOXD3Q9UJU5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 RNU6-525P-201ENST00000363685 104 ntBASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 MIR183-201ENST00000384958 110 ntBASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 MIR1289-1-201ENST00000408836 144 ntBASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 AC104619.4-201ENST00000510773 249 ntBASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 Y_RNA.692-201ENST00000516627 105 ntBASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 RNU7-149P-201ENST00000516739 59 ntBASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 Y_RNA.712-201ENST00000517011 92 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms