Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 SNORD59.2-201ENST00000516873 68 ntBASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 AC025647.1-201ENST00000517879 253 ntBASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 AC068657.1-201ENST00000520807 306 ntBASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 AC018630.3-201ENST00000542637 96 ntBASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 AC090049.2-201ENST00000550377 109 ntBASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.53□□□□□ -1.84
SALL4Q9UJQ4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.85
SALL4Q9UJQ4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RNU4-35P-201ENST00000362588 141 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RNA5SP139-201ENST00000364340 117 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 SNORA25.7-201ENST00000364375 127 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RNU6-1240P-201ENST00000365155 104 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RNU6-418P-201ENST00000384035 107 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 Y_RNA.432-201ENST00000384087 111 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RNU6-1235P-201ENST00000384559 107 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 Y_RNA.563-201ENST00000384707 108 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RN7SKP111-201ENST00000410349 271 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RNA5SP511-201ENST00000410487 115 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 AC023449.1-201ENST00000454464 154 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RNU6-498P-201ENST00000459468 107 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 AC010531.2-201ENST00000465012 153 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RPS27P22-201ENST00000478056 241 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RNU6-1299P-201ENST00000516316 100 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 RNU6-197P-201ENST00000516680 100 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 Y_RNA.757-201ENST00000578934 114 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 AC120024.3-201ENST00000603167 156 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 MIR7153-201ENST00000637758 57 ntBASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
SALL4Q9UJQ4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 RNU1-33P-201ENST00000364249 162 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 RNU6-1082P-201ENST00000364574 107 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 SNORA72-201ENST00000384339 132 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 MIR490-201ENST00000384865 128 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 CYCSP49-201ENST00000420810 319 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 AC016925.1-201ENST00000458303 298 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 RPS27P29-201ENST00000463110 252 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 RAC1P5-201ENST00000512182 576 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 RNU2-34P-201ENST00000516534 121 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 MIR3200-201ENST00000580767 85 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 MIR2681-201ENST00000581814 105 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 AL049861.1-201ENST00000603130 150 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 AC093732.2-201ENST00000607950 274 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 AC110079.1-202ENST00000635213 138 ntBASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SALL4Q9UJQ4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 RNA5SP383-201ENST00000362934 120 ntBASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 AC115115.1-201ENST00000449927 248 ntBASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 RN7SL807P-201ENST00000470923 297 ntBASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 AC015720.1-201ENST00000565251 277 ntBASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 SNORA50A-202ENST00000629536 136 ntBASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 AC091564.4-201ENST00000533934 2194 ntBASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SALL4Q9UJQ4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 RNY1P11-201ENST00000363759 113 ntBASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 RNU6-136P-201ENST00000384663 107 ntBASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 MICF-203ENST00000432679 129 ntBASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 RPL21P10-201ENST00000463521 490 ntBASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 RNA5SP76-201ENST00000516277 87 ntBASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 AL160236.1-201ENST00000556317 195 ntBASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 uc_338.1-201ENST00000612113 180 ntBASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 MIR7157-201ENST00000635801 60 ntBASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SALL4Q9UJQ4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SALL4Q9UJQ4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SALL4Q9UJQ4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.48□□□□□ -1.85
SALL4Q9UJQ4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.48□□□□□ -1.85
SALL4Q9UJQ4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms