Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 MIR1253-201ENST00000408273 105 ntBASIC3.66□□□□□ -1.82
CXXC1Q9P0U4 AC016909.1-201ENST00000415916 166 ntBASIC3.66□□□□□ -1.82
CXXC1Q9P0U4 RN7SL594P-201ENST00000470590 287 ntBASIC3.66□□□□□ -1.82
CXXC1Q9P0U4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.66□□□□□ -1.82
CXXC1Q9P0U4 RPS29P21-201ENST00000496272 170 ntBASIC3.66□□□□□ -1.82
CXXC1Q9P0U4 RNU6-479P-201ENST00000516348 105 ntBASIC3.66□□□□□ -1.82
CXXC1Q9P0U4 AC093908.1-201ENST00000623125 8092 ntBASIC3.66□□□□□ -1.82
CXXC1Q9P0U4 MIR3658-201ENST00000636291 56 ntBASIC3.66□□□□□ -1.82
CXXC1Q9P0U4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.65□□□□□ -1.82
CXXC1Q9P0U4 RNU1-23P-201ENST00000363361 144 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 Y_RNA.521-201ENST00000384560 114 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 AL138878.1-201ENST00000405131 347 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 RNU6-257P-201ENST00000410238 98 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 RNA5SP511-201ENST00000410487 115 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 AC123900.1-201ENST00000420390 96 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 RNU6-313P-201ENST00000516317 112 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 PRELID2P1-201ENST00000552837 301 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 AC112693.2-201ENST00000556538 232 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 AC015720.1-201ENST00000565251 277 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 MIR4438-201ENST00000585271 93 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 AL355297.2-201ENST00000604792 129 ntBASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CXXC1Q9P0U4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 RNU6-117P-201ENST00000365415 107 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 SNORA72-201ENST00000384339 132 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 RNU4-43P-201ENST00000410628 137 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 RNA5SP39-201ENST00000411245 120 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 RPS26P15-201ENST00000488067 348 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 AC093259.1-201ENST00000509755 300 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 RNU6-991P-201ENST00000516168 107 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 RNU6-561P-201ENST00000516222 102 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 RN7SKP209-201ENST00000516888 304 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 MIR3646-201ENST00000578301 84 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 AC110774.1-201ENST00000623567 2018 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXXC1Q9P0U4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 Y_RNA.332-201ENST00000365271 113 ntBASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 RNU6-1154P-201ENST00000391001 104 ntBASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 AL159169.1-201ENST00000421119 127 ntBASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 MTCO1P44-201ENST00000441935 243 ntBASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 RPS29P31-201ENST00000446147 164 ntBASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 RPS27P1-201ENST00000450552 247 ntBASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 AC097462.1-201ENST00000514125 324 ntBASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 RNA5SP272-201ENST00000516095 111 ntBASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 RNU7-172P-201ENST00000517125 64 ntBASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.63□□□□□ -1.83
CXXC1Q9P0U4 AC100821.1-201ENST00000523153 2479 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 RNU1-22P-201ENST00000363334 158 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 MIR561-201ENST00000385216 97 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 Y_RNA.587-201ENST00000391210 103 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 Y_RNA.622-201ENST00000411091 108 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 RN7SKP101-201ENST00000411376 320 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 AC023449.1-201ENST00000454464 154 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 RNU6-856P-201ENST00000516959 98 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 MIR2681-201ENST00000581814 105 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 RNVU1-4-201ENST00000612985 164 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 MIR6844-201ENST00000637122 62 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 AL355596.1-201ENST00000565399 3996 ntBASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.62□□□□□ -1.83
CXXC1Q9P0U4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CXXC1Q9P0U4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CXXC1Q9P0U4 RNU1-18P-201ENST00000363062 164 ntBASIC3.61□□□□□ -1.83
CXXC1Q9P0U4 RNA5SP42-201ENST00000364278 115 ntBASIC3.61□□□□□ -1.83
CXXC1Q9P0U4 RNU6-136P-201ENST00000384663 107 ntBASIC3.61□□□□□ -1.83
CXXC1Q9P0U4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.61□□□□□ -1.83
CXXC1Q9P0U4 AC006539.3-201ENST00000454258 129 ntBASIC3.61□□□□□ -1.83
CXXC1Q9P0U4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.61□□□□□ -1.83
CXXC1Q9P0U4 RNU6-1146P-201ENST00000516282 102 ntBASIC3.61□□□□□ -1.83
CXXC1Q9P0U4 MIR3616-201ENST00000584070 92 ntBASIC3.61□□□□□ -1.83
CXXC1Q9P0U4 MFSD8-233ENST00000641482 4860 ntBASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 SNORD45.3-201ENST00000363836 72 ntBASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 RNU6-1080P-201ENST00000383982 107 ntBASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 RN7SL863P-201ENST00000462370 296 ntBASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 YWHAEP4-201ENST00000505390 198 ntBASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 RNA5SP356-201ENST00000515972 94 ntBASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 AC012640.5-201ENST00000623897 319 ntBASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.6□□□□□ -1.83
CXXC1Q9P0U4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms