Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 RPS29P12-201ENST00000460178 152 ntBASIC3.33□□□□□ -1.88
LTBP3Q9NS15 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.33□□□□□ -1.88
LTBP3Q9NS15 Y_RNA.676-201ENST00000516393 96 ntBASIC3.33□□□□□ -1.88
LTBP3Q9NS15 AC018630.3-201ENST00000542637 96 ntBASIC3.33□□□□□ -1.88
LTBP3Q9NS15 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBP3Q9NS15 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
LTBP3Q9NS15 SNORD115-30-201ENST00000364117 82 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 RNA5SP205-201ENST00000364653 136 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LTBP3Q9NS15 AL035461.1-201ENST00000421490 332 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 RPL30P4-201ENST00000429309 333 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 AC008267.6-201ENST00000441664 139 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 RNU7-14P-201ENST00000459331 62 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.32□□□□□ -1.88
LTBP3Q9NS15 SNORA70.12-201ENST00000516084 153 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 AC104027.1-201ENST00000521887 300 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 MIR4753-201ENST00000585119 83 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 AC069294.1-201ENST00000608397 350 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 MIR5739-201ENST00000619803 80 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 snoU18.1-201ENST00000629629 71 ntBASIC3.32□□□□□ -1.88
LTBP3Q9NS15 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.31□□□□□ -1.88
LTBP3Q9NS15 RNU6-1272P-201ENST00000362776 107 ntBASIC3.31□□□□□ -1.88
LTBP3Q9NS15 Y_RNA.273-201ENST00000364703 102 ntBASIC3.31□□□□□ -1.88
LTBP3Q9NS15 RNU6-234P-201ENST00000365229 104 ntBASIC3.31□□□□□ -1.88
LTBP3Q9NS15 RNU6-1274P-201ENST00000384557 107 ntBASIC3.31□□□□□ -1.88
LTBP3Q9NS15 AL031003.1-201ENST00000404229 172 ntBASIC3.31□□□□□ -1.88
LTBP3Q9NS15 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.31□□□□□ -1.88
LTBP3Q9NS15 MIR1283-1-201ENST00000408494 87 ntBASIC3.31□□□□□ -1.88
LTBP3Q9NS15 AC080013.2-201ENST00000460866 323 ntBASIC3.31□□□□□ -1.88
LTBP3Q9NS15 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
LTBP3Q9NS15 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.31□□□□□ -1.88
LTBP3Q9NS15 AC105245.1-201ENST00000581934 244 ntBASIC3.31□□□□□ -1.88
LTBP3Q9NS15 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LTBP3Q9NS15 AC009487.2-201ENST00000420969 6821 ntBASIC3.31□□□□□ -1.88
LTBP3Q9NS15 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
LTBP3Q9NS15 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LTBP3Q9NS15 AC100821.1-201ENST00000523153 2479 ntBASIC3.3□□□□□ -1.88
LTBP3Q9NS15 RNU6-153P-201ENST00000364422 104 ntBASIC3.3□□□□□ -1.88
LTBP3Q9NS15 RNU6-449P-201ENST00000383914 107 ntBASIC3.3□□□□□ -1.88
LTBP3Q9NS15 RNU6-211P-201ENST00000384047 107 ntBASIC3.3□□□□□ -1.88
LTBP3Q9NS15 MIR1185-2-201ENST00000408687 86 ntBASIC3.3□□□□□ -1.88
LTBP3Q9NS15 AL603825.1-201ENST00000438481 80 ntBASIC3.3□□□□□ -1.88
LTBP3Q9NS15 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.3□□□□□ -1.88
LTBP3Q9NS15 CYP2C59P-201ENST00000457790 269 ntBASIC3.3□□□□□ -1.88
LTBP3Q9NS15 HMGN2P9-201ENST00000476875 229 ntBASIC3.3□□□□□ -1.88
LTBP3Q9NS15 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.3□□□□□ -1.88
LTBP3Q9NS15 AL078604.3-201ENST00000615580 211 ntBASIC3.3□□□□□ -1.88
LTBP3Q9NS15 U6.115-201ENST00000636045 103 ntBASIC3.3□□□□□ -1.88
LTBP3Q9NS15 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LTBP3Q9NS15 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LTBP3Q9NS15 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LTBP3Q9NS15 AC009487.4-201ENST00000624969 3585 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 SNORD114-7-201ENST00000362520 77 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 Y_RNA.215-201ENST00000364204 112 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 MIR512-1-201ENST00000384913 84 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 AL159169.1-201ENST00000421119 127 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 MIR2114-201ENST00000516645 80 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 RNU6-919P-201ENST00000516731 104 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 AC136628.3-201ENST00000521868 290 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
LTBP3Q9NS15 MIR3199-1-201ENST00000582434 88 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
LTBP3Q9NS15 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.29□□□□□ -1.88
LTBP3Q9NS15 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 RNU1-72P-201ENST00000362976 153 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 Y_RNA.261-201ENST00000364631 102 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 MIR218-1-201ENST00000384999 110 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 RNU6-257P-201ENST00000410238 98 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 RNA5SP425-201ENST00000410336 112 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 RNU6-1328P-201ENST00000410938 106 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 AL135786.1-201ENST00000415892 214 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 Z98742.3-201ENST00000418637 326 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 BTF3P11-201ENST00000426582 477 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 AC146507.2-201ENST00000460608 476 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 CKS1BP2-201ENST00000497342 240 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 RNU6-991P-201ENST00000516168 107 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 RNU6-426P-201ENST00000516464 97 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 DEFB122-202ENST00000569013 197 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 MIR5692C2-201ENST00000577959 77 ntBASIC3.28□□□□□ -1.88
LTBP3Q9NS15 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LTBP3Q9NS15 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LTBP3Q9NS15 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LTBP3Q9NS15 MIR26A1-201ENST00000362205 77 ntBASIC3.27□□□□□ -1.89
LTBP3Q9NS15 RNA5SP289-201ENST00000362332 137 ntBASIC3.27□□□□□ -1.89
LTBP3Q9NS15 RNU6-944P-201ENST00000364023 107 ntBASIC3.27□□□□□ -1.89
LTBP3Q9NS15 SNORD31B-201ENST00000364977 69 ntBASIC3.27□□□□□ -1.89
LTBP3Q9NS15 RNU4-53P-201ENST00000410828 140 ntBASIC3.27□□□□□ -1.89
LTBP3Q9NS15 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.27□□□□□ -1.89
LTBP3Q9NS15 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.27□□□□□ -1.89
LTBP3Q9NS15 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms