Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RNA5SP184-201ENST00000411071 108 ntBASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 RPL30P13-201ENST00000418873 348 ntBASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 AL137159.1-201ENST00000452808 512 ntBASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 SNORD65B-201ENST00000459126 73 ntBASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-221P-201ENST00000459541 99 ntBASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-948P-201ENST00000516374 107 ntBASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-1337P-201ENST00000516525 95 ntBASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 MIR4435-1-201ENST00000582552 80 ntBASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 uc_338.25-201ENST00000613756 156 ntBASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
ZFYVE28Q9HCC9 AC009487.2-201ENST00000420969 6821 ntBASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 SNORD50B-201ENST00000364995 70 ntBASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 MIR184-201ENST00000384962 84 ntBASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-1154P-201ENST00000391001 104 ntBASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-257P-201ENST00000410238 98 ntBASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 AC006461.1-201ENST00000412637 326 ntBASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
ZFYVE28Q9HCC9 AC010332.2-201ENST00000613083 1904 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 RNU4-82P-201ENST00000362443 140 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-199P-201ENST00000362954 107 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-407P-201ENST00000365280 104 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-728P-201ENST00000365375 104 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 MT-TT-201ENST00000387460 66 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 SNORA40-201ENST00000388090 126 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 AL606845.1-201ENST00000404881 255 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 RNA5SP229-201ENST00000410809 99 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-57P-201ENST00000411348 103 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 AL135938.1-201ENST00000443141 297 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 RNA5SP272-201ENST00000516095 111 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 MIR4319-201ENST00000577285 85 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 AC100821.1-201ENST00000523153 2479 ntBASIC3.6□□□□□ -1.83
ZFYVE28Q9HCC9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 MIR22-201ENST00000362190 85 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-1323P-201ENST00000384025 107 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 RNU6-383P-201ENST00000410864 94 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 AC105272.1-201ENST00000438604 198 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 RPS26P55-201ENST00000471178 356 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 RPL36AP21-201ENST00000490372 323 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 ATP5EP1-201ENST00000510257 156 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 RNU7-116P-201ENST00000516940 62 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 MIR4425-201ENST00000580572 84 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 POLR3GP1-201ENST00000594073 261 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 AP003357.1-201ENST00000604497 148 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 AC005972.2-201ENST00000604690 348 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 RMST_8.1-201ENST00000610287 165 ntBASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.59□□□□□ -1.83
ZFYVE28Q9HCC9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 RNU6-438P-201ENST00000365561 103 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 MIR15B-201ENST00000385045 98 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 RNU1-101P-201ENST00000391171 127 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 MIR1261-201ENST00000408659 82 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 RPS12P18-201ENST00000442381 270 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 AC016717.1-201ENST00000448918 286 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 RAC1P5-201ENST00000512182 576 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 SNORA25.12-201ENST00000516202 82 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 AC018630.3-201ENST00000542637 96 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 MIR4738-201ENST00000579134 87 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 AC002064.3-201ENST00000623448 346 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 Z82209.1-201ENST00000422141 2135 ntBASIC3.58□□□□□ -1.84
ZFYVE28Q9HCC9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZFYVE28Q9HCC9 AP003122.5-201ENST00000527668 3766 ntBASIC3.57□□□□□ -1.84
ZFYVE28Q9HCC9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZFYVE28Q9HCC9 RNU6-643P-201ENST00000384018 107 ntBASIC3.57□□□□□ -1.84
ZFYVE28Q9HCC9 RNY3P5-201ENST00000384127 102 ntBASIC3.57□□□□□ -1.84
ZFYVE28Q9HCC9 SNORD116-13-201ENST00000384408 92 ntBASIC3.57□□□□□ -1.84
ZFYVE28Q9HCC9 U6atac.2-201ENST00000408644 118 ntBASIC3.57□□□□□ -1.84
ZFYVE28Q9HCC9 AC010154.1-201ENST00000425857 269 ntBASIC3.57□□□□□ -1.84
ZFYVE28Q9HCC9 MICF-203ENST00000432679 129 ntBASIC3.57□□□□□ -1.84
ZFYVE28Q9HCC9 RNA5SP20-201ENST00000515976 84 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms