Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CDCP1Q9H5V8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 MIR6073-201ENST00000352083 89 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 Y_RNA.65-201ENST00000362846 100 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 RNU6-454P-201ENST00000364292 107 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 Y_RNA.277-201ENST00000364754 102 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 RNA5SP126-201ENST00000365092 109 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 Y_RNA.416-201ENST00000384014 113 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 RNU6-209P-201ENST00000384118 107 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 Y_RNA.541-201ENST00000384640 113 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 Y_RNA.581-201ENST00000391017 97 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 AL603910.2-201ENST00000407268 136 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 MIR548I3-201ENST00000408378 149 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 MIR548I1-201ENST00000408810 149 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 RNA5SP508-201ENST00000411327 119 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 SRIP3-201ENST00000413200 219 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 AC139712.2-201ENST00000424302 339 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 MTND2P29-201ENST00000438595 412 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 SUMO1P3-201ENST00000439961 304 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 SEPT14P8-201ENST00000508026 178 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 RNA5SP320-201ENST00000516263 124 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 NDUFA5P6-201ENST00000542110 379 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 MIR4435-1-201ENST00000582552 80 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 AC022441.3-201ENST00000605737 136 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 SNORD113-5-201ENST00000607261 78 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 U4.3-201ENST00000621047 82 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDCP1Q9H5V8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 Y_RNA.332-201ENST00000365271 113 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 RNU6-418P-201ENST00000384035 107 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 RNU6-301P-201ENST00000384277 107 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 RNU2-64P-201ENST00000411315 191 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 AC123900.1-201ENST00000420390 96 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 AC016717.1-201ENST00000448918 286 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 RPL23AP3-201ENST00000453844 468 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 RNU6-496P-201ENST00000516145 99 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 RNU6-1338P-201ENST00000516328 91 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 RNU6-948P-201ENST00000516374 107 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 snoZ196.1-201ENST00000625269 89 ntBASIC2.34□□□□□ -2.03
CDCP1Q9H5V8 ZNF271P-202ENST00000465539 1970 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 Y_RNA.20-201ENST00000362479 113 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 RNU4-90P-201ENST00000362773 141 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 Y_RNA.331-201ENST00000365267 102 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 Y_RNA.478-201ENST00000384358 107 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 MIR1185-2-201ENST00000408687 86 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 RNU6-1199P-201ENST00000411249 104 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 RNU6-57P-201ENST00000411348 103 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 RPL23AP36-201ENST00000413895 458 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 AC009963.1-201ENST00000417265 157 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 CR769767.1-201ENST00000436337 346 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 AC005042.3-201ENST00000453230 174 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 HSPE1P25-201ENST00000455484 251 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 RNU6-155P-201ENST00000516347 100 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 RNU2-34P-201ENST00000516534 121 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 MIR4446-201ENST00000578505 67 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 AC006380.1-201ENST00000603598 186 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 AL365434.2-201ENST00000607979 234 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 AC006001.4-201ENST00000622243 395 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 AC080100.1-201ENST00000624239 5356 ntBASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.33□□□□□ -2.04
CDCP1Q9H5V8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 MIR335-201ENST00000362173 94 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 SNORD81.1-201ENST00000363064 77 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 RNU6-200P-201ENST00000364743 107 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 RNU1-91P-201ENST00000364746 163 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 Y_RNA.446-201ENST00000384178 104 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 SNORD14D-201ENST00000384390 87 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 RNU6-1235P-201ENST00000384559 107 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 MIR548H3-201ENST00000408771 118 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 RNU2-54P-201ENST00000410299 190 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 RNU6-498P-201ENST00000459468 107 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 AC010531.2-201ENST00000465012 153 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 CYCSP26-201ENST00000534107 320 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 AC130289.1-201ENST00000577321 73 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 MIR4643-201ENST00000577473 78 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 AC013412.1-201ENST00000610687 192 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 CTSLP2-204ENST00000629029 392 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 FO624990.1-201ENST00000636373 85 ntBASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDCP1Q9H5V8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms