Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RPS29P23-201ENST00000458635 123 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 AC114982.1-201ENST00000469402 321 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.35□□□□□ -2.19
NXF3Q9H4D5 FGF7P4-201ENST00000509595 295 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU6-120P-201ENST00000516077 103 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU6-277P-201ENST00000516272 106 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU6-875P-201ENST00000516488 106 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 SCARNA16.2-201ENST00000516520 172 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU6-856P-201ENST00000516959 98 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 UBL5P4-201ENST00000562584 236 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 SUB1P4-201ENST00000566062 339 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.35□□□□□ -2.19
NXF3Q9H4D5 MIR5690-201ENST00000583739 73 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 AC073413.2-201ENST00000604332 360 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 SNORD11B-201ENST00000607707 90 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 MIR8074-201ENST00000615081 81 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 AC092794.2-201ENST00000620933 563 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 AC022513.1-201ENST00000624512 117 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 AC245060.5-201ENST00000610778 3293 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 RNU6-1305P-201ENST00000364353 104 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 RNY3P14-201ENST00000384309 102 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 RNA5SP504-201ENST00000410676 117 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 NDUFB4P10-201ENST00000452541 359 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 RPL17P19-201ENST00000489069 552 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 AC097473.1-201ENST00000508142 408 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 RNU6-1114P-201ENST00000516022 107 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.34□□□□□ -2.19
NXF3Q9H4D5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.34□□□□□ -2.19
NXF3Q9H4D5 APOOP3-201ENST00000536787 586 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.34□□□□□ -2.19
NXF3Q9H4D5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.34□□□□□ -2.19
NXF3Q9H4D5 AC080078.3-201ENST00000605407 463 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 AL132765.2-201ENST00000610812 351 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 AC068205.3-201ENST00000636385 468 ntBASIC1.34□□□□□ -2.19
NXF3Q9H4D5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.34□□□□□ -2.2
NXF3Q9H4D5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
NXF3Q9H4D5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
NXF3Q9H4D5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
NXF3Q9H4D5 MTND5P16-201ENST00000460269 1703 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 Y_RNA.106-201ENST00000363189 100 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 SNORA25.9-201ENST00000365087 128 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 Y_RNA.364-201ENST00000365532 101 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 Y_RNA.387-201ENST00000383918 102 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 RNU6-1235P-201ENST00000384559 107 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 RNU6-310P-201ENST00000384655 107 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 SNORA75.6-201ENST00000391318 127 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 MIR1276-201ENST00000408707 83 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 USP9YP16-201ENST00000430287 407 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 AL353997.1-201ENST00000432936 108 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 AC074290.1-201ENST00000448883 135 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 USP9YP23-201ENST00000455085 407 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 RNU6-498P-201ENST00000459468 107 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 AC093303.1-201ENST00000514549 295 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 RNU6-559P-201ENST00000516151 98 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 RNVU1-2-201ENST00000516326 135 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 MIR4422-201ENST00000581938 83 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 PRR13P7-201ENST00000605538 430 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 AL159152.1-201ENST00000635019 2587 ntBASIC1.33□□□□□ -2.2
NXF3Q9H4D5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
NXF3Q9H4D5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.32□□□□□ -2.2
NXF3Q9H4D5 RNU6-874P-201ENST00000362390 105 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 RNU6-222P-201ENST00000362438 107 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 Y_RNA.179-201ENST00000363844 90 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 RNU6-281P-201ENST00000384212 103 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 RNU6-793P-201ENST00000384233 104 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 RNU6-1297P-201ENST00000384415 104 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 MIR499A-201ENST00000384903 122 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NXF3Q9H4D5 MIR1287-201ENST00000408492 90 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 Y_RNA.646-201ENST00000410980 101 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 EBAG9P1-201ENST00000418955 543 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 EIF1P2-201ENST00000428233 350 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 FTH1P12-201ENST00000432137 551 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 ATP5J2P3-201ENST00000451550 258 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 RNU7-57P-201ENST00000459540 60 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 AC091179.3-201ENST00000474761 144 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 RNU6-507P-201ENST00000516045 100 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 Y_RNA.702-201ENST00000516843 96 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 SUMO2P18-201ENST00000518873 252 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 AC004584.2-201ENST00000570407 410 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 AC090617.3-201ENST00000573670 475 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 AL353149.1-201ENST00000610667 244 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 AC010999.1-201ENST00000611856 324 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 AC104260.1-201ENST00000616660 539 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 AL078596.1-201ENST00000624856 447 ntBASIC1.32□□□□□ -2.2
NXF3Q9H4D5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.32□□□□□ -2.2
NXF3Q9H4D5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
NXF3Q9H4D5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NXF3Q9H4D5 Y_RNA.67-201ENST00000362870 100 ntBASIC1.31□□□□□ -2.2
NXF3Q9H4D5 Y_RNA.70-201ENST00000362886 110 ntBASIC1.31□□□□□ -2.2
NXF3Q9H4D5 RNU1-22P-201ENST00000363334 158 ntBASIC1.31□□□□□ -2.2
NXF3Q9H4D5 U3.8-201ENST00000363675 217 ntBASIC1.31□□□□□ -2.2
NXF3Q9H4D5 Y_RNA.263-201ENST00000364659 114 ntBASIC1.31□□□□□ -2.2
NXF3Q9H4D5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
NXF3Q9H4D5 RNU6-1009P-201ENST00000390996 107 ntBASIC1.31□□□□□ -2.2
NXF3Q9H4D5 MTCYBP4-201ENST00000401524 249 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms