Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MIR3690-201ENST00000580266 75 ntBASIC3.85□□□□□ -1.79
NUCKS1Q9H1E3 MIR3609-201ENST00000582661 80 ntBASIC3.85□□□□□ -1.79
NUCKS1Q9H1E3 AL365205.2-201ENST00000594586 68 ntBASIC3.85□□□□□ -1.79
NUCKS1Q9H1E3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.85□□□□□ -1.79
NUCKS1Q9H1E3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.85□□□□□ -1.79
NUCKS1Q9H1E3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.85□□□□□ -1.79
NUCKS1Q9H1E3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NUCKS1Q9H1E3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NUCKS1Q9H1E3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 AC093010.3-201ENST00000570269 15214 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 RNU4-13P-201ENST00000364019 141 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 SNORA5A-201ENST00000384111 134 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 RNU1-57P-201ENST00000384491 166 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 PTMAP2-201ENST00000397627 327 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 EDDM3CP-201ENST00000415977 425 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 AC245291.1-201ENST00000419501 328 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 AC023449.1-201ENST00000454464 154 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 RNA5SP310-201ENST00000459084 116 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 SNORD11-201ENST00000459124 84 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 AC080013.2-201ENST00000460866 323 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 AC006483.1-201ENST00000487308 313 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 RNU5F-4P-201ENST00000516581 114 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 AC007751.1-201ENST00000529260 376 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 MIR4429-201ENST00000580105 73 ntBASIC3.84□□□□□ -1.79
NUCKS1Q9H1E3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NUCKS1Q9H1E3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 Y_RNA.203-201ENST00000364106 102 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 SNORD32B-201ENST00000364460 84 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 RNA5SP51-201ENST00000364750 119 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 RNA5SP173-201ENST00000364857 136 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 MIR488-201ENST00000365739 83 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 MIR181A2-201ENST00000384863 110 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 MIR1283-1-201ENST00000408494 87 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 AC010401.1-201ENST00000463867 348 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 RPL23AP67-201ENST00000465341 474 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 AC021205.2-201ENST00000480069 347 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 RPL21P129-201ENST00000491732 478 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 RNA5SP236-201ENST00000516169 116 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 RNA5SP380-201ENST00000517190 98 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 HSPE1P7-201ENST00000604681 321 ntBASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
NUCKS1Q9H1E3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 AC010889.1-201ENST00000566193 2666 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-117P-201ENST00000365415 107 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-1014P-201ENST00000383940 103 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-221P-201ENST00000459541 99 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 AC112771.1-201ENST00000463581 102 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 AC008155.2-201ENST00000464337 397 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 RPL27AP5-201ENST00000469428 449 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 RN7SKP43-201ENST00000516173 320 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 MIR2681-201ENST00000581814 105 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 MIR1245B-201ENST00000636115 69 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 FAM35CP-201ENST00000554755 2470 ntBASIC3.82□□□□□ -1.8
NUCKS1Q9H1E3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 MIR30E-201ENST00000362104 92 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 Y_RNA.66-201ENST00000362862 102 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-440P-201ENST00000390882 105 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 RNA5SP136-201ENST00000410906 107 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 AC245102.2-201ENST00000448956 180 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 RPL39P34-201ENST00000477141 156 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 AC104619.4-201ENST00000510773 249 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 RNA5SP281-201ENST00000516504 135 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 RNU7-149P-201ENST00000516739 59 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 MIR4474-201ENST00000579189 78 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 Pinc.1-201ENST00000616452 154 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 AL035470.1-201ENST00000622571 220 ntBASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUCKS1Q9H1E3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 Y_RNA.796-201ENST00000364268 102 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 Y_RNA.799-201ENST00000364992 102 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 Y_RNA.486-201ENST00000384398 107 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 MIR562-201ENST00000384894 95 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 MIR300-201ENST00000401138 83 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 RNU2-32P-201ENST00000411193 191 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-970P-201ENST00000516312 107 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-365P-201ENST00000517113 106 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 AC025647.1-201ENST00000517879 253 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 AC026403.1-201ENST00000518938 295 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 MIR4753-201ENST00000585119 83 ntBASIC3.8□□□□□ -1.8
NUCKS1Q9H1E3 RNU6-94P-201ENST00000607728 107 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms