Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AC073325.2-201ENST00000339545 159 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-234P-201ENST00000365229 104 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-975P-201ENST00000384296 105 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 MIR483-201ENST00000385070 76 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 ARF4P2-201ENST00000430209 526 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 SNORD65B-201ENST00000459126 73 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 AC092991.1-201ENST00000477176 376 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 MIR449C-201ENST00000516047 92 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-1234P-201ENST00000516877 103 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 MIR4325-201ENST00000583049 90 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 POLR3GP1-201ENST00000594073 261 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 AC005972.2-201ENST00000604690 348 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 AC005000.2-201ENST00000605468 310 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 AC011603.4-201ENST00000611325 277 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 AC007318.2-201ENST00000620999 243 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 MIR622-201ENST00000638396 96 ntBASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZKSCAN3Q9BRR0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZKSCAN3Q9BRR0 SNORA71.1-201ENST00000364523 117 ntBASIC3.57□□□□□ -1.84
ZKSCAN3Q9BRR0 SNORD14D-201ENST00000384390 87 ntBASIC3.57□□□□□ -1.84
ZKSCAN3Q9BRR0 RN7SKP220-201ENST00000410611 288 ntBASIC3.57□□□□□ -1.84
ZKSCAN3Q9BRR0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ZKSCAN3Q9BRR0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.57□□□□□ -1.84
ZKSCAN3Q9BRR0 AC109329.2-201ENST00000519658 482 ntBASIC3.57□□□□□ -1.84
ZKSCAN3Q9BRR0 AP001340.1-201ENST00000624405 217 ntBASIC3.57□□□□□ -1.84
ZKSCAN3Q9BRR0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 ZNF702P-202ENST00000434269 1966 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 SNORD31B-201ENST00000364977 69 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 SNORA75.5-201ENST00000391291 81 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 SNORA79-201ENST00000408376 140 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 AL135786.1-201ENST00000415892 214 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 AC010154.1-201ENST00000425857 269 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-437P-201ENST00000459408 95 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 RPL23AP54-201ENST00000495129 419 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 AP001328.1-201ENST00000528550 176 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
ZKSCAN3Q9BRR0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 SNORA14A-201ENST00000364773 135 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 MIR591-201ENST00000385290 95 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-460P-201ENST00000391158 108 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 RNA5SP496-201ENST00000391240 109 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-57P-201ENST00000411348 103 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 AC009414.1-201ENST00000427200 443 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 RNA5SP20-201ENST00000515976 84 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU4-57P-201ENST00000515980 135 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 AC006435.5-201ENST00000624486 112 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 CENPCP1-201ENST00000533085 2578 ntBASIC3.55□□□□□ -1.84
ZKSCAN3Q9BRR0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 AL356292.1-201ENST00000283110 373 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-834P-201ENST00000362367 110 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 RNA5SP383-201ENST00000362934 120 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-674P-201ENST00000363831 107 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 SNORD45.3-201ENST00000363836 72 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-944P-201ENST00000364023 107 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 AL512604.1-201ENST00000404812 257 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 MIR1278-201ENST00000408753 81 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 RN7SKP101-201ENST00000411376 320 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 Z82209.1-201ENST00000422141 2135 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 S100A11P2-201ENST00000467589 312 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 RPL27AP5-201ENST00000469428 449 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 ATP5EP1-201ENST00000510257 156 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 Y_RNA.686-201ENST00000516548 134 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-919P-201ENST00000516731 104 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-711P-201ENST00000517255 106 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 U7.2-201ENST00000607576 63 ntBASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.54□□□□□ -1.84
ZKSCAN3Q9BRR0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 AC007256.1-201ENST00000392253 2765 ntBASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-588P-201ENST00000410281 105 ntBASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 Y_RNA.622-201ENST00000411091 108 ntBASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 AL035461.1-201ENST00000421490 332 ntBASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.53□□□□□ -1.84
ZKSCAN3Q9BRR0 RNU6-948P-201ENST00000516374 107 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 356.4 ms