Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 SNORA40.12-201ENST00000516329 111 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 RNU6-1332P-201ENST00000516666 104 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 RNU6-1198P-201ENST00000516904 67 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 AC027419.1-201ENST00000522976 328 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.52□□□□□ -2.33
VAT1Q99536 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.52□□□□□ -2.33
VAT1Q99536 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.52□□□□□ -2.33
VAT1Q99536 MIR151B-201ENST00000584249 96 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 AL133215.3-201ENST00000609801 448 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 AL096861.1-201ENST00000610899 123 ntBASIC0.52□□□□□ -2.33
VAT1Q99536 Y_RNA.167-201ENST00000363735 109 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 RNU6-873P-201ENST00000363833 107 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 RNU4-20P-201ENST00000365601 151 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 RNU6-110P-201ENST00000384508 104 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.51□□□□□ -2.33
VAT1Q99536 AC245047.8-201ENST00000456455 284 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 LINC01399-202ENST00000458450 244 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 MTND3P7-201ENST00000474435 343 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.51□□□□□ -2.33
VAT1Q99536 RNU7-12P-201ENST00000516030 62 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 AC004832.4-201ENST00000608952 331 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 AC092807.2-201ENST00000609367 243 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 AC007684.1-201ENST00000609671 477 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 AL158209.2-201ENST00000619266 216 ntBASIC0.51□□□□□ -2.33
VAT1Q99536 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
VAT1Q99536 SNORD115-32-201ENST00000364079 82 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 RNU4-9P-201ENST00000364951 139 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 Y_RNA.319-201ENST00000365138 92 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 MIR499A-201ENST00000384903 122 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 RN7SKP142-201ENST00000411236 328 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.5□□□□□ -2.33
VAT1Q99536 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 FABP5P4-201ENST00000437203 171 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.5□□□□□ -2.33
VAT1Q99536 AC104332.1-201ENST00000440471 797 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 MTCO2P7-201ENST00000446518 666 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 MTND4P18-201ENST00000447010 465 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 AC091179.3-201ENST00000474761 144 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 RPS27P22-201ENST00000478056 241 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.5□□□□□ -2.33
VAT1Q99536 AC010469.2-201ENST00000496412 480 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.5□□□□□ -2.33
VAT1Q99536 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.5□□□□□ -2.33
VAT1Q99536 AC027288.2-201ENST00000553028 243 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.5□□□□□ -2.33
VAT1Q99536 AL117336.2-201ENST00000602435 335 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 AL391903.3-201ENST00000612158 163 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 FAM157A-202ENST00000615155 405 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 AC073534.2-201ENST00000620377 381 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 AC006504.8-201ENST00000621046 635 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.5□□□□□ -2.33
VAT1Q99536 AC005592.1-201ENST00000566527 1640 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
VAT1Q99536 RNA5SP347-201ENST00000362445 119 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 SNORD113-7-201ENST00000363762 77 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 RNU6-1335P-201ENST00000365426 107 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.49□□□□□ -2.33
VAT1Q99536 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.49□□□□□ -2.33
VAT1Q99536 RNU6-1208P-201ENST00000459588 107 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 AC113410.1-201ENST00000505029 247 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 RNU7-28P-201ENST00000516759 62 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.49□□□□□ -2.33
VAT1Q99536 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.49□□□□□ -2.33
VAT1Q99536 MIR5000-201ENST00000577717 103 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 AL512605.2-201ENST00000592972 256 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 AC012557.2-201ENST00000605919 418 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 AC006435.5-201ENST00000624486 112 ntBASIC0.49□□□□□ -2.33
VAT1Q99536 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.49□□□□□ -2.33
VAT1Q99536 Y_RNA.1-201ENST00000352915 104 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 EIF4E2P1-201ENST00000393781 255 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 MTCO1P20-201ENST00000425366 358 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 AL353572.1-201ENST00000442490 417 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.48□□□□□ -2.33
VAT1Q99536 AC010598.1-201ENST00000510378 103 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 SNORA70.12-201ENST00000516084 153 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 AC026371.1-201ENST00000551867 419 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 MTATP6P24-201ENST00000576835 677 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 MIR3192-201ENST00000584920 77 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 AL158063.1-201ENST00000615349 536 ntBASIC0.48□□□□□ -2.33
VAT1Q99536 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.48□□□□□ -2.33
VAT1Q99536 MIRLET7C-201ENST00000362160 84 ntBASIC0.47□□□□□ -2.33
VAT1Q99536 RNA5SP499-201ENST00000363982 119 ntBASIC0.47□□□□□ -2.33
VAT1Q99536 MIR153-2-201ENST00000385225 87 ntBASIC0.47□□□□□ -2.33
VAT1Q99536 RNU6-159P-201ENST00000391080 106 ntBASIC0.47□□□□□ -2.33
VAT1Q99536 RNU7-187P-201ENST00000458985 68 ntBASIC0.47□□□□□ -2.33
VAT1Q99536 AC098869.1-201ENST00000481627 292 ntBASIC0.47□□□□□ -2.33
VAT1Q99536 AC091885.1-201ENST00000506658 268 ntBASIC0.47□□□□□ -2.33
VAT1Q99536 AC097462.1-201ENST00000514125 324 ntBASIC0.47□□□□□ -2.33
VAT1Q99536 RNU2-56P-201ENST00000516826 190 ntBASIC0.47□□□□□ -2.33
VAT1Q99536 AC009248.2-201ENST00000619826 254 ntBASIC0.47□□□□□ -2.33
VAT1Q99536 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
VAT1Q99536 SNORA1B-201ENST00000362535 133 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 Y_RNA.267-201ENST00000364679 109 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 RNU6-793P-201ENST00000384233 104 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.46□□□□□ -2.34
VAT1Q99536 MTCO3P19-201ENST00000415864 321 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
VAT1Q99536 MTND3P16-201ENST00000452205 344 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms