Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC104383.1-201ENST00000530297 370 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AC095057.3-201ENST00000567102 1157 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AL596327.1-201ENST00000603629 213 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AC096586.1-201ENST00000610267 561 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AC063943.3-201ENST00000615562 356 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AL359547.2-201ENST00000615810 418 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AC103705.1-201ENST00000619013 241 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 MIR655-201ENST00000362159 97 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 RNU6-359P-201ENST00000365466 108 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 RNU6-417P-201ENST00000384712 107 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 RNU6-932P-201ENST00000391108 106 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 COX7BP2-201ENST00000437976 242 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AC005002.2-201ENST00000438228 269 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AC010486.2-201ENST00000505572 483 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AC112206.4-201ENST00000515142 405 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 RNU6-416P-201ENST00000516265 103 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 AL139286.2-201ENST00000606838 396 ntBASIC-0.72□□□□□ -2.52
SPG11Q96JI7 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 RNU6-652P-201ENST00000365488 107 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 RNU6-114P-201ENST00000384704 105 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.73□□□□□ -2.53
SPG11Q96JI7 MTCO3P9-201ENST00000506989 781 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 SNORA74.3-201ENST00000517108 154 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 AC026421.1-201ENST00000519101 163 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 MTND4P33-201ENST00000556706 766 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 MIR4771-2-201ENST00000577758 74 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 MIR4771-1-201ENST00000582617 74 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 FRG1KP-201ENST00000623592 341 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
SPG11Q96JI7 RNU6-487P-201ENST00000365430 104 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 SNORA24.1-201ENST00000384401 135 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 RNU6-455P-201ENST00000384681 107 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 MTCO2P33-201ENST00000402100 465 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 AC244670.1-201ENST00000436879 112 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 SUMO1P3-201ENST00000439961 304 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.73□□□□□ -2.53
SPG11Q96JI7 AC010468.3-201ENST00000508225 458 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 AC234772.3-201ENST00000602277 528 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 AL158050.2-201ENST00000605336 568 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 SNORA70.25-201ENST00000612741 95 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.73□□□□□ -2.53
SPG11Q96JI7 RNU1-76P-201ENST00000362903 159 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 SNORA33-201ENST00000363664 130 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 MIR421-201ENST00000365696 85 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 RNU6-701P-201ENST00000384059 107 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.74□□□□□ -2.53
SPG11Q96JI7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.74□□□□□ -2.53
SPG11Q96JI7 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 AC138915.2-201ENST00000569776 97 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 MIR1273C-201ENST00000578669 77 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 AC110760.3-201ENST00000598794 467 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
SPG11Q96JI7 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 SNORD28-201ENST00000384706 75 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 SNORD56B-201ENST00000384713 71 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 RNU6-535P-201ENST00000384722 107 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.74□□□□□ -2.53
SPG11Q96JI7 AC106883.1-201ENST00000418805 562 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 AC092427.1-201ENST00000439177 601 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.74□□□□□ -2.53
SPG11Q96JI7 RPL39P6-201ENST00000448289 150 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 RNU7-94P-201ENST00000459576 63 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 AC103996.1-201ENST00000555468 102 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 MIR4639-201ENST00000584938 69 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.74□□□□□ -2.53
SPG11Q96JI7 MIR4251-201ENST00000635819 61 ntBASIC-0.74□□□□□ -2.53
SPG11Q96JI7 RNU6-428P-201ENST00000362942 107 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-934P-201ENST00000365154 107 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 MIR544A-201ENST00000384855 91 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 MIR452-201ENST00000385020 85 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-440P-201ENST00000390882 105 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 AL590084.2-201ENST00000401481 382 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 AL590002.1-201ENST00000406554 418 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-447P-201ENST00000410293 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-355P-201ENST00000410427 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-791P-201ENST00000410467 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-77P-201ENST00000410554 91 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-705P-201ENST00000410601 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-860P-201ENST00000410860 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNU6-785P-201ENST00000411324 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.75□□□□□ -2.53
SPG11Q96JI7 snoU13.2-201ENST00000459201 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 snoU13.16-201ENST00000459350 104 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 RNA5SP66-201ENST00000517178 101 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 AC011458.1-201ENST00000604034 617 ntBASIC-0.75□□□□□ -2.53
SPG11Q96JI7 U6.90-201ENST00000614007 104 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms