Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.32□□□□□ -1.88
SHISA4Q96DD7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SHISA4Q96DD7 AC108206.1-201ENST00000570186 4159 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SHISA4Q96DD7 AC096644.4-201ENST00000563417 2912 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 Y_RNA.172-201ENST00000363765 102 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 RNU6-1048P-201ENST00000364054 107 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 RNU6-969P-201ENST00000383900 105 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 Y_RNA.420-201ENST00000384043 110 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 RNU6-44P-201ENST00000384045 107 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 RNU6-80P-201ENST00000384195 107 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 RNU6-851P-201ENST00000384565 107 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 Y_RNA.542-201ENST00000384641 111 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 MIR181A2-201ENST00000384863 110 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SHISA4Q96DD7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.31□□□□□ -1.88
SHISA4Q96DD7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.31□□□□□ -1.88
SHISA4Q96DD7 RNU2-44P-201ENST00000516795 194 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 RNU6-711P-201ENST00000517255 106 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 AL391813.1-201ENST00000603098 260 ntBASIC3.31□□□□□ -1.88
SHISA4Q96DD7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHISA4Q96DD7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHISA4Q96DD7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHISA4Q96DD7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SHISA4Q96DD7 RNU4-15P-201ENST00000362613 141 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 U3.8-201ENST00000363675 217 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 SNORA18.2-201ENST00000383865 132 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 RNU6-144P-201ENST00000383951 107 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 SNORA3.2-201ENST00000408221 125 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 AC004866.1-201ENST00000411748 78 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 AC023141.4-201ENST00000412031 328 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 snoU13.23-201ENST00000458863 104 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 SRIP1-201ENST00000489235 288 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 SCARNA8-201ENST00000515924 131 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 RNU6-453P-201ENST00000516819 85 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.3□□□□□ -1.88
SHISA4Q96DD7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.3□□□□□ -1.88
SHISA4Q96DD7 SNORD53-201ENST00000579969 78 ntBASIC3.3□□□□□ -1.88
SHISA4Q96DD7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.3□□□□□ -1.88
SHISA4Q96DD7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.3□□□□□ -1.88
SHISA4Q96DD7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA4Q96DD7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SHISA4Q96DD7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
SHISA4Q96DD7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA4Q96DD7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SHISA4Q96DD7 RNU6-834P-201ENST00000362367 110 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 Y_RNA.40-201ENST00000362645 93 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 U8.2-201ENST00000363156 134 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 RNU6-1325P-201ENST00000364905 105 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 Y_RNA.310-201ENST00000365063 113 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.29□□□□□ -1.88
SHISA4Q96DD7 Y_RNA.572-201ENST00000384757 98 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 MIR147B-201ENST00000390185 80 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 MIR764-201ENST00000390811 85 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 RNU6-1228P-201ENST00000391014 107 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 AL591034.1-201ENST00000407447 340 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 AIMP1P2-201ENST00000425294 312 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 AC245047.8-201ENST00000456455 284 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 AC145146.1-201ENST00000496370 254 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 Y_RNA.686-201ENST00000516548 134 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 RNU6-1234P-201ENST00000516877 103 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 MIR4724-201ENST00000579485 89 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 HSPE1P7-201ENST00000604681 321 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 AC011603.4-201ENST00000611325 277 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.29□□□□□ -1.88
SHISA4Q96DD7 MIR6076-201ENST00000617521 113 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 U6.115-201ENST00000636045 103 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA4Q96DD7 AC068700.1-201ENST00000565862 3754 ntBASIC3.29□□□□□ -1.88
SHISA4Q96DD7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.29□□□□□ -1.88
SHISA4Q96DD7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.28□□□□□ -1.88
SHISA4Q96DD7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SHISA4Q96DD7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
SHISA4Q96DD7 RNU6-643P-201ENST00000384018 107 ntBASIC3.28□□□□□ -1.88
SHISA4Q96DD7 RNA5SP504-201ENST00000410676 117 ntBASIC3.28□□□□□ -1.88
SHISA4Q96DD7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SHISA4Q96DD7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.28□□□□□ -1.88
SHISA4Q96DD7 RNU7-141P-201ENST00000459304 62 ntBASIC3.28□□□□□ -1.88
SHISA4Q96DD7 AC003982.1-202ENST00000469928 248 ntBASIC3.28□□□□□ -1.88
SHISA4Q96DD7 AC006483.1-201ENST00000487308 313 ntBASIC3.28□□□□□ -1.88
SHISA4Q96DD7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.28□□□□□ -1.88
SHISA4Q96DD7 RNU4-57P-201ENST00000515980 135 ntBASIC3.28□□□□□ -1.88
SHISA4Q96DD7 MIR3646-201ENST00000578301 84 ntBASIC3.28□□□□□ -1.88
SHISA4Q96DD7 AC093908.1-201ENST00000623125 8092 ntBASIC3.28□□□□□ -1.88
SHISA4Q96DD7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.28□□□□□ -1.88
SHISA4Q96DD7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.27□□□□□ -1.89
SHISA4Q96DD7 MIR367-201ENST00000362299 68 ntBASIC3.27□□□□□ -1.89
SHISA4Q96DD7 RNU6-859P-201ENST00000362728 107 ntBASIC3.27□□□□□ -1.89
SHISA4Q96DD7 SNORA9.2-201ENST00000365361 133 ntBASIC3.27□□□□□ -1.89
SHISA4Q96DD7 RNU6-728P-201ENST00000365375 104 ntBASIC3.27□□□□□ -1.89
SHISA4Q96DD7 MIR15B-201ENST00000385045 98 ntBASIC3.27□□□□□ -1.89
SHISA4Q96DD7 RNU6-991P-201ENST00000516168 107 ntBASIC3.27□□□□□ -1.89
SHISA4Q96DD7 AC026241.1-201ENST00000517873 2142 ntBASIC3.27□□□□□ -1.89
SHISA4Q96DD7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.27□□□□□ -1.89
SHISA4Q96DD7 AC006111.3-201ENST00000622137 383 ntBASIC3.27□□□□□ -1.89
SHISA4Q96DD7 MIR6844-201ENST00000637122 62 ntBASIC3.27□□□□□ -1.89
SHISA4Q96DD7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.27□□□□□ -1.89
SHISA4Q96DD7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.27□□□□□ -1.89
SHISA4Q96DD7 ZNF658B-202ENST00000615961 3375 ntBASIC3.26□□□□□ -1.89
SHISA4Q96DD7 AC069528.2-201ENST00000624849 1991 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms