Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 MIR3683-201ENST00000580847 82 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.84□□□□□ -2.11
SKA1Q96BD8 AC084768.2-201ENST00000622736 221 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 AC006435.5-201ENST00000624486 112 ntBASIC1.84□□□□□ -2.11
SKA1Q96BD8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.84□□□□□ -2.12
SKA1Q96BD8 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 SNORA4.2-201ENST00000365313 147 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 RNA5SP213-201ENST00000391031 106 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 SNORA75.4-201ENST00000391278 119 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 FGF7P8-201ENST00000402994 292 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 RNU2-20P-201ENST00000410425 191 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 RNU6-1001P-201ENST00000411265 100 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 RPS26P45-201ENST00000471748 340 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.83□□□□□ -2.12
SKA1Q96BD8 RNA5SP445-201ENST00000515889 115 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 RNU6-970P-201ENST00000516312 107 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.83□□□□□ -2.12
SKA1Q96BD8 AC004584.2-201ENST00000570407 410 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 MIR3684-201ENST00000579779 74 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 U6.73-201ENST00000619194 103 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 AC092794.2-201ENST00000620933 563 ntBASIC1.83□□□□□ -2.12
SKA1Q96BD8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SKA1Q96BD8 RNU6-879P-201ENST00000364328 108 ntBASIC1.82□□□□□ -2.12
SKA1Q96BD8 RNA5SP190-201ENST00000365222 118 ntBASIC1.82□□□□□ -2.12
SKA1Q96BD8 RNA5SP109-201ENST00000391010 116 ntBASIC1.82□□□□□ -2.12
SKA1Q96BD8 AC092423.1-201ENST00000430165 186 ntBASIC1.82□□□□□ -2.12
SKA1Q96BD8 RPS26P55-201ENST00000471178 356 ntBASIC1.82□□□□□ -2.12
SKA1Q96BD8 RPL17P19-201ENST00000489069 552 ntBASIC1.82□□□□□ -2.12
SKA1Q96BD8 AC079140.2-201ENST00000506193 142 ntBASIC1.82□□□□□ -2.12
SKA1Q96BD8 AC125232.2-201ENST00000592457 143 ntBASIC1.82□□□□□ -2.12
SKA1Q96BD8 AC095038.3-201ENST00000634439 195 ntBASIC1.82□□□□□ -2.12
SKA1Q96BD8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.81□□□□□ -2.12
SKA1Q96BD8 Y_RNA.404-201ENST00000383978 102 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 MIR329-1-201ENST00000385028 80 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 SNORA67.5-201ENST00000391036 107 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 RNU11-5P-201ENST00000391216 129 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 RPL21P1-201ENST00000399532 476 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 RNU7-94P-201ENST00000459576 63 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.81□□□□□ -2.12
SKA1Q96BD8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.81□□□□□ -2.12
SKA1Q96BD8 RNU6-1053P-201ENST00000515930 101 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 RNU7-99P-201ENST00000516271 62 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 Y_RNA.691-201ENST00000516611 103 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.81□□□□□ -2.12
SKA1Q96BD8 FRG2DP-202ENST00000566967 323 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 MIR4498-201ENST00000577599 66 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 AC104260.1-201ENST00000616660 539 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 U6.108-201ENST00000637764 58 ntBASIC1.81□□□□□ -2.12
SKA1Q96BD8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.8□□□□□ -2.12
SKA1Q96BD8 SNORD1A-201ENST00000364968 72 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.8□□□□□ -2.12
SKA1Q96BD8 RNU6-1264P-201ENST00000383891 107 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 RNU6-203P-201ENST00000384038 104 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 Y_RNA.557-201ENST00000384680 107 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 RN7SKP200-201ENST00000410564 320 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 AL161935.2-201ENST00000414627 60 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 SNORD65B-201ENST00000459126 73 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 AC010598.1-201ENST00000510378 103 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 AC074133.1-201ENST00000515696 183 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 SCARNA16.2-201ENST00000516520 172 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.8□□□□□ -2.12
SKA1Q96BD8 MIR4419B-201ENST00000577260 68 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 TPTEP1-208ENST00000636884 213 ntBASIC1.8□□□□□ -2.12
SKA1Q96BD8 MIR378A-201ENST00000362177 66 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 MIR302D-201ENST00000362275 68 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 RNU6-1145P-201ENST00000384246 107 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 AC004965.1-201ENST00000413033 213 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 AC108667.1-201ENST00000428618 249 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 RPS27P22-201ENST00000478056 241 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 RNU6-902P-201ENST00000517212 91 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 AC022868.1-201ENST00000517767 391 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.79□□□□□ -2.12
SKA1Q96BD8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.79□□□□□ -2.12
SKA1Q96BD8 AC015688.6-201ENST00000577737 104 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 MIR4438-201ENST00000585271 93 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 AP001485.1-201ENST00000604799 199 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 AC022306.2-201ENST00000617563 647 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 AL669831.3-213ENST00000636676 183 ntBASIC1.79□□□□□ -2.12
SKA1Q96BD8 Y_RNA.358-201ENST00000365491 99 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 MIR194-1-201ENST00000384892 85 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 AL627390.1-201ENST00000396055 340 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 MTCYBP4-201ENST00000401524 249 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 AC005002.2-201ENST00000438228 269 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 MRPS10P1-201ENST00000448483 130 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 PCNPP5-201ENST00000452246 481 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 RN7SKP49-201ENST00000516675 260 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 RNU6-250P-201ENST00000516958 103 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 MIR2355-201ENST00000517199 87 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 MIR3937-201ENST00000580135 106 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.78□□□□□ -2.12
SKA1Q96BD8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SKA1Q96BD8 AL121890.5-201ENST00000620848 304 ntBASIC1.78□□□□□ -2.12
SKA1Q96BD8 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.78□□□□□ -2.12
SKA1Q96BD8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.78□□□□□ -2.12
SKA1Q96BD8 MIR337-201ENST00000362281 93 ntBASIC1.77□□□□□ -2.13
SKA1Q96BD8 RNU6-1123P-201ENST00000362347 106 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms