Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 MIR4659A-201ENST00000580269 81 ntBASIC1.94□□□□□ -2.1
SLC38A9Q8NBW4 AC011476.5-201ENST00000615594 130 ntBASIC1.94□□□□□ -2.1
SLC38A9Q8NBW4 U6.92-201ENST00000636464 89 ntBASIC1.94□□□□□ -2.1
SLC38A9Q8NBW4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SLC38A9Q8NBW4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SLC38A9Q8NBW4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SLC38A9Q8NBW4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 RNU6-1266P-201ENST00000362794 105 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 RNU6-1264P-201ENST00000383891 107 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 RNU6-1011P-201ENST00000384668 107 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 MIR1253-201ENST00000408273 105 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 AC008134.1-201ENST00000420943 193 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 TOMM22P2-201ENST00000430735 237 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 RNU6-221P-201ENST00000459541 99 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 AC104435.1-201ENST00000483483 166 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 AC010469.2-201ENST00000496412 480 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 AC040926.1-201ENST00000530195 238 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 DEFB122-202ENST00000569013 197 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 MIR3169-201ENST00000578032 83 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 AL390123.1-201ENST00000603216 237 ntBASIC1.93□□□□□ -2.1
SLC38A9Q8NBW4 AC092881.1-201ENST00000638218 2733 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 RNU4-50P-201ENST00000364361 141 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 SNORA16B-201ENST00000364674 135 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 RNA5SP37-201ENST00000365420 130 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 MRPL42P3-201ENST00000401492 326 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 MIR1283-2-201ENST00000408621 87 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 SDAD1P3-201ENST00000427380 333 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 RAB28P5-201ENST00000427490 651 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 AC112492.4-201ENST00000456549 352 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 AC055731.1-201ENST00000474387 401 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 RPS27P21-201ENST00000486977 252 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 AC090255.1-201ENST00000495779 349 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 AC016925.2-201ENST00000605108 242 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 AC240442.1-201ENST00000616055 283 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 MIR3674-201ENST00000636576 68 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.92□□□□□ -2.1
SLC38A9Q8NBW4 MTND4P1-201ENST00000457501 1466 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 SNORA72.2-201ENST00000365028 127 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 AC117470.1-201ENST00000381974 330 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 Y_RNA.389-201ENST00000383924 113 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 MIR17-201ENST00000385012 84 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 RNU6-101P-201ENST00000410323 104 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 AC060773.1-201ENST00000421698 310 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 AC093852.1-201ENST00000503587 266 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 AC108210.2-201ENST00000503681 201 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 AC011406.1-201ENST00000512440 370 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 AC005786.1-201ENST00000588553 154 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 AL109918.3-201ENST00000603072 338 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 AC124312.5-201ENST00000604451 268 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SLC38A9Q8NBW4 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 RNU6-961P-201ENST00000363893 105 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 Y_RNA.471-201ENST00000384312 102 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 HMGN2P38-201ENST00000423806 265 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 HMGN2P34-201ENST00000437647 269 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 MTCYBP6-201ENST00000441810 138 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 Y_RNA.721-201ENST00000517207 102 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 AC025647.1-201ENST00000517879 253 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 AL121655.1-201ENST00000605811 308 ntBASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.9□□□□□ -2.11
SLC38A9Q8NBW4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 RNU6-626P-201ENST00000363354 107 ntBASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 SNORA63-201ENST00000363450 132 ntBASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 RNA5SP99-201ENST00000364020 114 ntBASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 MRPL35P1-201ENST00000404272 572 ntBASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 CYCSP49-201ENST00000420810 319 ntBASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 AL353689.1-201ENST00000438895 199 ntBASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 U8.20-201ENST00000459445 131 ntBASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 RNU6-295P-201ENST00000516901 104 ntBASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 AC005176.2-201ENST00000596933 147 ntBASIC1.89□□□□□ -2.11
SLC38A9Q8NBW4 U1.36-201ENST00000620684 176 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms