Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RNU6-1255P-201ENST00000363434 112 ntBASIC3.42□□□□□ -1.86
SOX4Q06945 RNU6-484P-201ENST00000384016 107 ntBASIC3.42□□□□□ -1.86
SOX4Q06945 MIR29B2-201ENST00000385055 81 ntBASIC3.42□□□□□ -1.86
SOX4Q06945 RNA5SP252-201ENST00000391131 119 ntBASIC3.42□□□□□ -1.86
SOX4Q06945 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.42□□□□□ -1.86
SOX4Q06945 RNA5SP20-201ENST00000515976 84 ntBASIC3.42□□□□□ -1.86
SOX4Q06945 RNA5SP341-201ENST00000516261 117 ntBASIC3.42□□□□□ -1.86
SOX4Q06945 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.42□□□□□ -1.86
SOX4Q06945 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.42□□□□□ -1.86
SOX4Q06945 AL021707.8-201ENST00000609428 183 ntBASIC3.42□□□□□ -1.86
SOX4Q06945 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.42□□□□□ -1.86
SOX4Q06945 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX4Q06945 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX4Q06945 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SOX4Q06945 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.41□□□□□ -1.86
SOX4Q06945 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.41□□□□□ -1.86
SOX4Q06945 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX4Q06945 Y_RNA.120-201ENST00000363304 110 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 Y_RNA.280-201ENST00000364765 112 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 SNORA54-201ENST00000384281 123 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 NDUFB4P4-201ENST00000404822 243 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.41□□□□□ -1.86
SOX4Q06945 CST9LP2-201ENST00000437612 320 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.41□□□□□ -1.86
SOX4Q06945 RNU6-221P-201ENST00000459541 99 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 S100A11P2-201ENST00000467589 312 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 AC008885.1-201ENST00000514930 301 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 RNU6-1299P-201ENST00000516316 100 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.41□□□□□ -1.86
SOX4Q06945 AC133485.4-201ENST00000561835 220 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 AC138907.4-201ENST00000570107 226 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 AL049861.1-201ENST00000603130 150 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 AC090517.3-201ENST00000625170 141 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 Z82209.1-201ENST00000422141 2135 ntBASIC3.41□□□□□ -1.86
SOX4Q06945 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX4Q06945 AC138915.1-201ENST00000565427 1685 ntBASIC3.4□□□□□ -1.86
SOX4Q06945 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SOX4Q06945 RNU6-975P-201ENST00000384296 105 ntBASIC3.4□□□□□ -1.87
SOX4Q06945 AC090515.1-201ENST00000465295 476 ntBASIC3.4□□□□□ -1.87
SOX4Q06945 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.4□□□□□ -1.87
SOX4Q06945 SNORA31.21-201ENST00000517180 77 ntBASIC3.4□□□□□ -1.87
SOX4Q06945 SCARNA20.6-201ENST00000517251 106 ntBASIC3.4□□□□□ -1.87
SOX4Q06945 AL160236.1-201ENST00000556317 195 ntBASIC3.4□□□□□ -1.87
SOX4Q06945 MIR4474-201ENST00000579189 78 ntBASIC3.4□□□□□ -1.87
SOX4Q06945 MIR4425-201ENST00000580572 84 ntBASIC3.4□□□□□ -1.87
SOX4Q06945 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.4□□□□□ -1.87
SOX4Q06945 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.4□□□□□ -1.87
SOX4Q06945 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.4□□□□□ -1.87
SOX4Q06945 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.4□□□□□ -1.87
SOX4Q06945 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SOX4Q06945 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
SOX4Q06945 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SOX4Q06945 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX4Q06945 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX4Q06945 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.39□□□□□ -1.87
SOX4Q06945 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.39□□□□□ -1.87
SOX4Q06945 Y_RNA.114-201ENST00000363265 113 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 RNU6-147P-201ENST00000383983 107 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 MIR181A2-201ENST00000384863 110 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 MIR1294-201ENST00000408503 142 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 RNA5SP511-201ENST00000410487 115 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 RNU6-57P-201ENST00000411348 103 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 Y_RNA.630-201ENST00000411370 108 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 MLLT10P1-201ENST00000418346 262 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 AC016717.1-201ENST00000448918 286 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 RPL27AP5-201ENST00000469428 449 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 RNU6-1061P-201ENST00000516530 99 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 AL162274.2-201ENST00000614406 332 ntBASIC3.39□□□□□ -1.87
SOX4Q06945 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.39□□□□□ -1.87
SOX4Q06945 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
SOX4Q06945 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX4Q06945 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.38□□□□□ -1.87
SOX4Q06945 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.38□□□□□ -1.87
SOX4Q06945 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.38□□□□□ -1.87
SOX4Q06945 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SOX4Q06945 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SOX4Q06945 MIR422A-201ENST00000362286 90 ntBASIC3.38□□□□□ -1.87
SOX4Q06945 RNU4-13P-201ENST00000364019 141 ntBASIC3.38□□□□□ -1.87
SOX4Q06945 DYNLT3P1-201ENST00000378574 347 ntBASIC3.38□□□□□ -1.87
SOX4Q06945 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SOX4Q06945 AC063976.4-201ENST00000421971 163 ntBASIC3.38□□□□□ -1.87
SOX4Q06945 AC010531.2-201ENST00000465012 153 ntBASIC3.38□□□□□ -1.87
SOX4Q06945 SNORD33.1-201ENST00000516213 88 ntBASIC3.38□□□□□ -1.87
SOX4Q06945 AC131055.1-201ENST00000584626 316 ntBASIC3.38□□□□□ -1.87
SOX4Q06945 AL670379.3-201ENST00000605040 251 ntBASIC3.38□□□□□ -1.87
SOX4Q06945 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX4Q06945 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX4Q06945 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX4Q06945 AC080013.2-201ENST00000460866 323 ntBASIC3.37□□□□□ -1.87
SOX4Q06945 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
SOX4Q06945 AC083906.5-201ENST00000503722 328 ntBASIC3.37□□□□□ -1.87
SOX4Q06945 AC109329.2-201ENST00000519658 482 ntBASIC3.37□□□□□ -1.87
SOX4Q06945 AC015720.1-201ENST00000565251 277 ntBASIC3.37□□□□□ -1.87
SOX4Q06945 AC006111.3-201ENST00000622137 383 ntBASIC3.37□□□□□ -1.87
SOX4Q06945 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX4Q06945 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SOX4Q06945 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SOX4Q06945 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SOX4Q06945 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms