Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GPC1P35052 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
GPC1P35052 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.66□□□□□ -1.82
GPC1P35052 MIR6500-201ENST00000622700 86 ntBASIC3.66□□□□□ -1.82
GPC1P35052 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.66□□□□□ -1.82
GPC1P35052 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
GPC1P35052 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.65□□□□□ -1.82
GPC1P35052 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
GPC1P35052 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
GPC1P35052 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.65□□□□□ -1.82
GPC1P35052 RNU1-18P-201ENST00000363062 164 ntBASIC3.65□□□□□ -1.83
GPC1P35052 RNU1-105P-201ENST00000363470 161 ntBASIC3.65□□□□□ -1.83
GPC1P35052 RNU6-743P-201ENST00000364151 106 ntBASIC3.65□□□□□ -1.83
GPC1P35052 Y_RNA.213-201ENST00000364178 111 ntBASIC3.65□□□□□ -1.83
GPC1P35052 SNORD24-201ENST00000383884 75 ntBASIC3.65□□□□□ -1.83
GPC1P35052 MIR1193-201ENST00000408109 78 ntBASIC3.65□□□□□ -1.83
GPC1P35052 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.65□□□□□ -1.83
GPC1P35052 RNU6-638P-201ENST00000516582 104 ntBASIC3.65□□□□□ -1.83
GPC1P35052 RNY4P20-201ENST00000516678 93 ntBASIC3.65□□□□□ -1.83
GPC1P35052 SCARNA15-202ENST00000516881 127 ntBASIC3.65□□□□□ -1.83
GPC1P35052 AC068657.1-201ENST00000520807 306 ntBASIC3.65□□□□□ -1.83
GPC1P35052 AC141557.1-201ENST00000540982 400 ntBASIC3.65□□□□□ -1.83
GPC1P35052 MIR5009-201ENST00000578736 100 ntBASIC3.65□□□□□ -1.83
GPC1P35052 AC090115.4-201ENST00000609970 188 ntBASIC3.65□□□□□ -1.83
GPC1P35052 U7.8-201ENST00000619968 63 ntBASIC3.65□□□□□ -1.83
GPC1P35052 MIR1248-201ENST00000629190 106 ntBASIC3.65□□□□□ -1.83
GPC1P35052 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
GPC1P35052 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
GPC1P35052 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
GPC1P35052 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GPC1P35052 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
GPC1P35052 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
GPC1P35052 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.64□□□□□ -1.83
GPC1P35052 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.64□□□□□ -1.83
GPC1P35052 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.64□□□□□ -1.83
GPC1P35052 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
GPC1P35052 RNU6-486P-201ENST00000363116 107 ntBASIC3.64□□□□□ -1.83
GPC1P35052 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
GPC1P35052 RNA5SP317-201ENST00000410176 116 ntBASIC3.64□□□□□ -1.83
GPC1P35052 RNA5SP311-201ENST00000411290 116 ntBASIC3.64□□□□□ -1.83
GPC1P35052 HMGN2P34-201ENST00000437647 269 ntBASIC3.64□□□□□ -1.83
GPC1P35052 AC025750.2-201ENST00000442609 450 ntBASIC3.64□□□□□ -1.83
GPC1P35052 RAC1P2-201ENST00000511164 579 ntBASIC3.64□□□□□ -1.83
GPC1P35052 RNA5SP315-201ENST00000516340 116 ntBASIC3.64□□□□□ -1.83
GPC1P35052 RNU6-1291P-201ENST00000516591 104 ntBASIC3.64□□□□□ -1.83
GPC1P35052 RNA5SP312-201ENST00000517068 116 ntBASIC3.64□□□□□ -1.83
GPC1P35052 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
GPC1P35052 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.64□□□□□ -1.83
GPC1P35052 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.64□□□□□ -1.83
GPC1P35052 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
GPC1P35052 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
GPC1P35052 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GPC1P35052 SPRR2C-201ENST00000290702 219 ntBASIC3.63□□□□□ -1.83
GPC1P35052 Y_RNA.253-201ENST00000364562 112 ntBASIC3.63□□□□□ -1.83
GPC1P35052 RNU6-1275P-201ENST00000391087 107 ntBASIC3.63□□□□□ -1.83
GPC1P35052 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.63□□□□□ -1.83
GPC1P35052 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.63□□□□□ -1.83
GPC1P35052 AC026402.1-201ENST00000513642 170 ntBASIC3.63□□□□□ -1.83
GPC1P35052 SNORA4.4-201ENST00000515921 135 ntBASIC3.63□□□□□ -1.83
GPC1P35052 RN7SKP12-201ENST00000516275 143 ntBASIC3.63□□□□□ -1.83
GPC1P35052 AC068339.1-201ENST00000526965 141 ntBASIC3.63□□□□□ -1.83
GPC1P35052 YPEL5P3-201ENST00000547227 352 ntBASIC3.63□□□□□ -1.83
GPC1P35052 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.63□□□□□ -1.83
GPC1P35052 MIR3160-1-201ENST00000577972 85 ntBASIC3.63□□□□□ -1.83
GPC1P35052 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.63□□□□□ -1.83
GPC1P35052 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GPC1P35052 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GPC1P35052 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
GPC1P35052 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
GPC1P35052 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GPC1P35052 RNU6-690P-201ENST00000365242 106 ntBASIC3.62□□□□□ -1.83
GPC1P35052 MIR548A2-201ENST00000384956 97 ntBASIC3.62□□□□□ -1.83
GPC1P35052 RNU6-628P-201ENST00000410675 107 ntBASIC3.62□□□□□ -1.83
GPC1P35052 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC1P35052 SNRPGP13-201ENST00000442212 177 ntBASIC3.62□□□□□ -1.83
GPC1P35052 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.62□□□□□ -1.83
GPC1P35052 RNU6-1231P-201ENST00000517185 103 ntBASIC3.62□□□□□ -1.83
GPC1P35052 AC008507.4-201ENST00000585464 127 ntBASIC3.62□□□□□ -1.83
GPC1P35052 AL606490.9-201ENST00000603331 271 ntBASIC3.62□□□□□ -1.83
GPC1P35052 AC244205.2-202ENST00000635781 342 ntBASIC3.62□□□□□ -1.83
GPC1P35052 MIR376A2-201ENST00000636782 80 ntBASIC3.62□□□□□ -1.83
GPC1P35052 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GPC1P35052 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
GPC1P35052 AC002546.1-201ENST00000588041 2504 ntBASIC3.61□□□□□ -1.83
GPC1P35052 RNU6-1083P-201ENST00000384022 107 ntBASIC3.61□□□□□ -1.83
GPC1P35052 ARF4P2-201ENST00000430209 526 ntBASIC3.61□□□□□ -1.83
GPC1P35052 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
GPC1P35052 TRBV12-2-201ENST00000489763 344 ntBASIC3.61□□□□□ -1.83
GPC1P35052 RNU6-830P-201ENST00000516353 107 ntBASIC3.61□□□□□ -1.83
GPC1P35052 RN7SKP282-201ENST00000516824 299 ntBASIC3.61□□□□□ -1.83
GPC1P35052 MIR2116-201ENST00000517221 80 ntBASIC3.61□□□□□ -1.83
GPC1P35052 AC022695.1-201ENST00000522089 237 ntBASIC3.61□□□□□ -1.83
GPC1P35052 AC007224.1-201ENST00000564410 144 ntBASIC3.61□□□□□ -1.83
GPC1P35052 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GPC1P35052 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
GPC1P35052 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
GPC1P35052 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
GPC1P35052 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
GPC1P35052 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GPC1P35052 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 321 ms