Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MIR1248-201ENST00000629190 106 ntBASIC2.96□□□□□ -1.94
COL6A2P12110 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.96□□□□□ -1.94
COL6A2P12110 AC108206.1-201ENST00000570186 4159 ntBASIC2.96□□□□□ -1.94
COL6A2P12110 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL6A2P12110 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL6A2P12110 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
COL6A2P12110 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.95□□□□□ -1.94
COL6A2P12110 MIR22-201ENST00000362190 85 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 RNA5SP240-201ENST00000365355 128 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 RNU4-17P-201ENST00000365598 141 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 SNORA20B-201ENST00000384220 132 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 RNA5SP492-201ENST00000411330 114 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.95□□□□□ -1.94
COL6A2P12110 RPL23AP7-203ENST00000449021 469 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 HMGN2P18-201ENST00000450680 270 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 SNORD65B-201ENST00000459126 73 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.95□□□□□ -1.94
COL6A2P12110 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.95□□□□□ -1.94
COL6A2P12110 AC023141.11-201ENST00000508864 202 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 RNU2-34P-201ENST00000516534 121 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 SNORA48.11-201ENST00000517015 89 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 RN7SKP57-201ENST00000517248 293 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.95□□□□□ -1.94
COL6A2P12110 AC090115.4-201ENST00000609970 188 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 AC108706.1-201ENST00000611053 297 ntBASIC2.95□□□□□ -1.94
COL6A2P12110 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
COL6A2P12110 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.95□□□□□ -1.94
COL6A2P12110 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL6A2P12110 SNORA27.1-201ENST00000362604 124 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 RNU6-271P-201ENST00000363858 105 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 Y_RNA.238-201ENST00000364441 102 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 RNU6-312P-201ENST00000364629 107 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 Y_RNA.506-201ENST00000384494 102 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 RNU6-1235P-201ENST00000384559 107 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 RNU2-32P-201ENST00000411193 191 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.94□□□□□ -1.94
COL6A2P12110 AL121890.1-201ENST00000435457 205 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 RPS29P6-201ENST00000438196 145 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 RNU6-498P-201ENST00000459468 107 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 RNU6-1278P-201ENST00000516130 107 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 Y_RNA.703-201ENST00000516846 111 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.94□□□□□ -1.94
COL6A2P12110 MIR5680-201ENST00000577577 84 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 AC006435.5-201ENST00000624486 112 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.94□□□□□ -1.94
COL6A2P12110 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL6A2P12110 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL6A2P12110 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.94□□□□□ -1.94
COL6A2P12110 AC068700.1-201ENST00000565862 3754 ntBASIC2.94□□□□□ -1.94
COL6A2P12110 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.93□□□□□ -1.94
COL6A2P12110 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.93□□□□□ -1.94
COL6A2P12110 RNU1-35P-201ENST00000362782 153 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 Y_RNA.75-201ENST00000362927 97 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 RNY1P5-201ENST00000383890 115 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 RNU6-125P-201ENST00000384505 107 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 MIR627-201ENST00000384979 97 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 MIR626-201ENST00000385032 94 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 RNU6-1135P-201ENST00000411083 103 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 AC091021.1-201ENST00000468051 388 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 RPL36AP21-201ENST00000490372 323 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 AC025647.1-201ENST00000517879 253 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 MIR3133-201ENST00000583157 78 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.93□□□□□ -1.94
COL6A2P12110 MIR7112-201ENST00000616126 65 ntBASIC2.93□□□□□ -1.94
COL6A2P12110 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.93□□□□□ -1.94
COL6A2P12110 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
COL6A2P12110 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.93□□□□□ -1.94
COL6A2P12110 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
COL6A2P12110 AL365361.1-201ENST00000566942 3481 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.92□□□□□ -1.94
COL6A2P12110 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL6A2P12110 RNU6-774P-201ENST00000363238 107 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 Y_RNA.170-201ENST00000363746 110 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 RNU6-438P-201ENST00000365561 103 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 RNU6-144P-201ENST00000383951 107 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 SNORA8.3-201ENST00000384679 139 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 SNORA48.2-201ENST00000390926 124 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 RNU6-381P-201ENST00000391259 108 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 MTCO2P33-201ENST00000402100 465 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 RNU6-57P-201ENST00000411348 103 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 AC016717.1-201ENST00000448918 286 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 EEF1B2P7-201ENST00000451177 676 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 RNU7-141P-201ENST00000459304 62 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 RPPH1-2P-201ENST00000516688 293 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 AC021269.2-201ENST00000532318 330 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 AC107016.2-201ENST00000547968 190 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.92□□□□□ -1.94
COL6A2P12110 MIR3144-201ENST00000579460 79 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 MIR4513-201ENST00000581077 86 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL6A2P12110 MIR3616-201ENST00000584070 92 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 AC021753.1-201ENST00000635724 168 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 AC134026.1-201ENST00000623249 2239 ntBASIC2.92□□□□□ -1.94
COL6A2P12110 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL6A2P12110 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.91□□□□□ -1.94
COL6A2P12110 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.91□□□□□ -1.94
COL6A2P12110 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL6A2P12110 Y_RNA.23-201ENST00000362496 106 ntBASIC2.91□□□□□ -1.94
COL6A2P12110 Y_RNA.124-201ENST00000363339 93 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms