Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU6-1082P-201ENST00000364574 107 ntBASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 RNA5SP126-201ENST00000365092 109 ntBASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 RNU6-1228P-201ENST00000391014 107 ntBASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 RNU6-383P-201ENST00000410864 94 ntBASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 RN7SL93P-201ENST00000463035 293 ntBASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 AC006254.2-201ENST00000603259 279 ntBASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 uc_338.25-201ENST00000613756 156 ntBASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CSB-PGBD3P0DP91 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.21□□□□□ -1.73
CSB-PGBD3P0DP91 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 RNU6-728P-201ENST00000365375 104 ntBASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 Y_RNA.456-201ENST00000384232 111 ntBASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 AL512604.1-201ENST00000404812 257 ntBASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 RNU6-772P-201ENST00000516042 105 ntBASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 RNU1-117P-201ENST00000517041 158 ntBASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 AC108081.1-201ENST00000604358 221 ntBASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 AC099778.2-201ENST00000610904 211 ntBASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.21□□□□□ -1.74
CSB-PGBD3P0DP91 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 MIR423-201ENST00000362201 94 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 Y_RNA.361-201ENST00000365515 120 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 SNORA54-201ENST00000384281 123 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 SNORA75.5-201ENST00000391291 81 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 RNA5SP229-201ENST00000410809 99 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 EEF1A1P41-201ENST00000414667 207 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 RNA5SP356-201ENST00000515972 94 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 RNU6-168P-201ENST00000516189 101 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 MIR4724-201ENST00000579485 89 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 U6.115-201ENST00000636045 103 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 AC068205.3-201ENST00000636385 468 ntBASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSB-PGBD3P0DP91 CENPCP1-201ENST00000533085 2578 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 RNU1-75P-201ENST00000347264 129 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 Y_RNA.309-201ENST00000365046 111 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 RNU6-1336P-201ENST00000383886 109 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 SNORD15B-201ENST00000384714 146 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 AL138878.1-201ENST00000405131 347 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 AC063976.4-201ENST00000421971 163 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 RN7SL330P-201ENST00000469709 307 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 GTF3AP2-201ENST00000557014 266 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 MIR5688-201ENST00000580619 83 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 MIR7515-201ENST00000637837 67 ntBASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.19□□□□□ -1.74
CSB-PGBD3P0DP91 SNORD32B-201ENST00000364460 84 ntBASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 RN7SKP220-201ENST00000410611 288 ntBASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 RPS29P12-201ENST00000460178 152 ntBASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 CENPBD1P1-201ENST00000464061 469 ntBASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 SEM1P1-201ENST00000506694 209 ntBASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 AC091826.1-201ENST00000514065 313 ntBASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 NDUFB9P3-201ENST00000521269 501 ntBASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 AL031274.2-201ENST00000599419 203 ntBASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CSB-PGBD3P0DP91 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 MIR367-201ENST00000362299 68 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 U8.7-201ENST00000364940 136 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 SNORA48.8-201ENST00000391324 134 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 RNU4-43P-201ENST00000410628 137 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 RNU6-1328P-201ENST00000410938 106 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 CST9LP2-201ENST00000437612 320 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 RPS4XP2-201ENST00000458402 793 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 SNORD33.1-201ENST00000516213 88 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 AC120024.3-201ENST00000603167 156 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 RPL17P51-201ENST00000605218 238 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 MIR622-201ENST00000638396 96 ntBASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSB-PGBD3P0DP91 AP003122.5-201ENST00000527668 3766 ntBASIC4.16□□□□□ -1.74
CSB-PGBD3P0DP91 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CSB-PGBD3P0DP91 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.16□□□□□ -1.74
CSB-PGBD3P0DP91 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.16□□□□□ -1.74
CSB-PGBD3P0DP91 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CSB-PGBD3P0DP91 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CSB-PGBD3P0DP91 Y_RNA.630-201ENST00000411370 108 ntBASIC4.16□□□□□ -1.74
CSB-PGBD3P0DP91 ARF4P2-201ENST00000430209 526 ntBASIC4.16□□□□□ -1.74
CSB-PGBD3P0DP91 AC025754.2-201ENST00000606491 432 ntBASIC4.16□□□□□ -1.74
CSB-PGBD3P0DP91 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CSB-PGBD3P0DP91 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms