Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFAP04085 DYNLT3P1-201ENST00000378574 347 ntBASIC3.44□□□□□ -1.86
PDGFAP04085 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PDGFAP04085 AC063976.3-201ENST00000426849 329 ntBASIC3.44□□□□□ -1.86
PDGFAP04085 RNU2-56P-201ENST00000516826 190 ntBASIC3.44□□□□□ -1.86
PDGFAP04085 RNU6-1234P-201ENST00000516877 103 ntBASIC3.44□□□□□ -1.86
PDGFAP04085 RN7SKP57-201ENST00000517248 293 ntBASIC3.44□□□□□ -1.86
PDGFAP04085 RPL23AP91-201ENST00000569211 455 ntBASIC3.44□□□□□ -1.86
PDGFAP04085 MIR3117-201ENST00000584034 78 ntBASIC3.44□□□□□ -1.86
PDGFAP04085 AC120024.3-201ENST00000603167 156 ntBASIC3.44□□□□□ -1.86
PDGFAP04085 AL355297.2-201ENST00000604792 129 ntBASIC3.44□□□□□ -1.86
PDGFAP04085 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFAP04085 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFAP04085 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFAP04085 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFAP04085 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PDGFAP04085 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PDGFAP04085 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFAP04085 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFAP04085 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFAP04085 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.43□□□□□ -1.86
PDGFAP04085 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFAP04085 Y_RNA.111-201ENST00000363248 100 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 SNORA25.7-201ENST00000364375 127 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 RNU6-484P-201ENST00000384016 107 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 MIR561-201ENST00000385216 97 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PDGFAP04085 SNORA48.2-201ENST00000390926 124 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 AC245102.2-201ENST00000448956 180 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 RNU4-57P-201ENST00000515980 135 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 AC011604.1-201ENST00000545978 196 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 SNORA62.6-201ENST00000606322 83 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 U2.20-201ENST00000613956 192 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 uc_338.4-201ENST00000616635 176 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 U6.73-201ENST00000619194 103 ntBASIC3.43□□□□□ -1.86
PDGFAP04085 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFAP04085 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFAP04085 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFAP04085 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFAP04085 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.42□□□□□ -1.86
PDGFAP04085 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PDGFAP04085 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFAP04085 SNORD9-201ENST00000362566 104 ntBASIC3.42□□□□□ -1.86
PDGFAP04085 Y_RNA.251-201ENST00000364551 99 ntBASIC3.42□□□□□ -1.86
PDGFAP04085 SNORD21-201ENST00000383953 95 ntBASIC3.42□□□□□ -1.86
PDGFAP04085 MIR634-201ENST00000385208 97 ntBASIC3.42□□□□□ -1.86
PDGFAP04085 RNU11-5P-201ENST00000391216 129 ntBASIC3.42□□□□□ -1.86
PDGFAP04085 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.42□□□□□ -1.86
PDGFAP04085 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.42□□□□□ -1.86
PDGFAP04085 RPS29P31-201ENST00000446147 164 ntBASIC3.42□□□□□ -1.86
PDGFAP04085 RNA5SP208-201ENST00000516156 78 ntBASIC3.42□□□□□ -1.86
PDGFAP04085 RNA5SP153-201ENST00000516498 76 ntBASIC3.42□□□□□ -1.86
PDGFAP04085 RNA5SP164-201ENST00000516533 110 ntBASIC3.42□□□□□ -1.86
PDGFAP04085 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.42□□□□□ -1.86
PDGFAP04085 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.42□□□□□ -1.86
PDGFAP04085 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFAP04085 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFAP04085 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDGFAP04085 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFAP04085 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFAP04085 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PDGFAP04085 RNA5SP50-201ENST00000363731 107 ntBASIC3.41□□□□□ -1.86
PDGFAP04085 RNU6-1082P-201ENST00000364574 107 ntBASIC3.41□□□□□ -1.86
PDGFAP04085 MIR520G-201ENST00000385064 90 ntBASIC3.41□□□□□ -1.86
PDGFAP04085 Y_RNA.584-201ENST00000391090 114 ntBASIC3.41□□□□□ -1.86
PDGFAP04085 RNU2-70P-201ENST00000410718 179 ntBASIC3.41□□□□□ -1.86
PDGFAP04085 HMGN2P34-201ENST00000437647 269 ntBASIC3.41□□□□□ -1.86
PDGFAP04085 SNORD77.4-201ENST00000516158 81 ntBASIC3.41□□□□□ -1.86
PDGFAP04085 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFAP04085 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFAP04085 AL137849.1-201ENST00000604767 169 ntBASIC3.41□□□□□ -1.86
PDGFAP04085 AL591424.2-201ENST00000617023 128 ntBASIC3.41□□□□□ -1.86
PDGFAP04085 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PDGFAP04085 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFAP04085 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PDGFAP04085 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.4□□□□□ -1.86
PDGFAP04085 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.4□□□□□ -1.86
PDGFAP04085 RNU6-915P-201ENST00000364943 103 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 Y_RNA.353-201ENST00000365440 108 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 MIR128-1-201ENST00000384921 82 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 SNORA26-201ENST00000391286 122 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 RNU2-48P-201ENST00000410694 191 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 CYCSP4-201ENST00000429682 331 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 RN7SL601P-201ENST00000471221 293 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 RNU6-126P-201ENST00000516685 103 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 SNORA70.18-201ENST00000516696 98 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 AC008011.1-201ENST00000545989 227 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.4□□□□□ -1.87
PDGFAP04085 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.4□□□□□ -1.87
PDGFAP04085 CEP170P1-201ENST00000502249 4587 ntBASIC3.4□□□□□ -1.87
PDGFAP04085 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDGFAP04085 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFAP04085 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFAP04085 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFAP04085 RNU6-978P-201ENST00000364371 103 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 AC060773.1-201ENST00000421698 310 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 RPS15AP28-201ENST00000435088 386 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 SNORD105B-201ENST00000458770 79 ntBASIC3.39□□□□□ -1.87
PDGFAP04085 SNORD11-201ENST00000459124 84 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms