Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 Y_RNA.49-201ENST00000362714 112 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 RNU6-888P-201ENST00000363010 101 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 RNU6-1113P-201ENST00000384348 107 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 AC025750.2-201ENST00000442609 450 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 HMGN2P32-201ENST00000444648 269 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 SNORD105B-201ENST00000458770 79 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 NDUFA4P2-201ENST00000489989 244 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 HMGN1P7-201ENST00000491722 313 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 AC104619.4-201ENST00000510773 249 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 SNORA4.4-201ENST00000515921 135 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 RNU6-1149P-201ENST00000516810 97 ntBASIC4.11□□□□□ -1.75
HOXA2O43364 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXA2O43364 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXA2O43364 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA2O43364 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA2O43364 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXA2O43364 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXA2O43364 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXA2O43364 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
HOXA2O43364 MAPK10-373ENST00000641983 6772 ntBASIC4.1□□□□□ -1.75
HOXA2O43364 RNU1-72P-201ENST00000362976 153 ntBASIC4.1□□□□□ -1.75
HOXA2O43364 SNORD61-201ENST00000384252 73 ntBASIC4.1□□□□□ -1.75
HOXA2O43364 ATP5A1P2-201ENST00000412323 255 ntBASIC4.1□□□□□ -1.75
HOXA2O43364 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXA2O43364 AC007179.3-201ENST00000604976 235 ntBASIC4.1□□□□□ -1.75
HOXA2O43364 MIR1248-201ENST00000629190 106 ntBASIC4.1□□□□□ -1.75
HOXA2O43364 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA2O43364 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXA2O43364 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA2O43364 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA2O43364 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA2O43364 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA2O43364 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXA2O43364 Y_RNA.549-201ENST00000384657 102 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 Y_RNA.558-201ENST00000384685 113 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 MIR218-2-201ENST00000385006 110 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 SNORA12.1-201ENST00000390873 148 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 SNRPGP10-201ENST00000432323 225 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 SCARNA17.1-201ENST00000516211 143 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 SCARNA17.2-201ENST00000516334 143 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 SNORA40.13-201ENST00000516379 120 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 AC073413.2-201ENST00000604332 360 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA2O43364 SCARNA17.4-201ENST00000614296 143 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 MFSD8-236ENST00000641509 4050 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 AL589743.1-201ENST00000551932 2712 ntBASIC4.09□□□□□ -1.75
HOXA2O43364 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.09□□□□□ -1.76
HOXA2O43364 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HOXA2O43364 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HOXA2O43364 MAPK10-322ENST00000641485 4530 ntBASIC4.09□□□□□ -1.76
HOXA2O43364 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.08□□□□□ -1.76
HOXA2O43364 Y_RNA.366-201ENST00000365540 102 ntBASIC4.08□□□□□ -1.76
HOXA2O43364 RPS15AP28-201ENST00000435088 386 ntBASIC4.08□□□□□ -1.76
HOXA2O43364 AC080128.1-201ENST00000474389 1917 ntBASIC4.08□□□□□ -1.76
HOXA2O43364 RPL39P34-201ENST00000477141 156 ntBASIC4.08□□□□□ -1.76
HOXA2O43364 RNA5SP281-201ENST00000516504 135 ntBASIC4.08□□□□□ -1.76
HOXA2O43364 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA2O43364 MIR5047-201ENST00000579212 100 ntBASIC4.08□□□□□ -1.76
HOXA2O43364 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HOXA2O43364 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA2O43364 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA2O43364 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA2O43364 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
HOXA2O43364 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA2O43364 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HOXA2O43364 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
HOXA2O43364 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA2O43364 RNU6-1014P-201ENST00000383940 103 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 RNU6-546P-201ENST00000383991 107 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 Y_RNA.544-201ENST00000384650 113 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 MIR183-201ENST00000384958 110 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 SNORA26.2-201ENST00000390922 122 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 AL590004.2-201ENST00000404787 371 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 EDDM3CP-201ENST00000415977 425 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 AC009414.1-201ENST00000427200 443 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA2O43364 AP001486.1-201ENST00000463339 476 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 RN7SL330P-201ENST00000469709 307 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 AC011406.1-201ENST00000512440 370 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 AC026726.1-201ENST00000512859 601 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 RNU6-1146P-201ENST00000516282 102 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 RNU6-856P-201ENST00000516959 98 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 RNU6-1231P-201ENST00000517185 103 ntBASIC4.07□□□□□ -1.76
HOXA2O43364 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA2O43364 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXA2O43364 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
HOXA2O43364 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA2O43364 Y_RNA.253-201ENST00000364562 112 ntBASIC4.06□□□□□ -1.76
HOXA2O43364 RNA5SP51-201ENST00000364750 119 ntBASIC4.06□□□□□ -1.76
HOXA2O43364 RNU6-1131P-201ENST00000364955 107 ntBASIC4.06□□□□□ -1.76
HOXA2O43364 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HOXA2O43364 HMGN2P34-201ENST00000437647 269 ntBASIC4.06□□□□□ -1.76
HOXA2O43364 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXA2O43364 RN7SL293P-201ENST00000481765 281 ntBASIC4.06□□□□□ -1.76
HOXA2O43364 RNU6-693P-201ENST00000516134 107 ntBASIC4.06□□□□□ -1.76
HOXA2O43364 RNU6-970P-201ENST00000516312 107 ntBASIC4.06□□□□□ -1.76
HOXA2O43364 SCARNA11.3-201ENST00000517276 130 ntBASIC4.06□□□□□ -1.76
HOXA2O43364 AC008507.4-201ENST00000585464 127 ntBASIC4.06□□□□□ -1.76
HOXA2O43364 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms