Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC188H7C350 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 AC022432.1-201ENST00000595739 310 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC188H7C350 ICE2P2-201ENST00000483823 2787 ntBASIC1.63□□□□□ -2.15
CCDC188H7C350 Y_RNA.67-201ENST00000362870 100 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 SNORA63D-201ENST00000364359 132 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 Y_RNA.358-201ENST00000365491 99 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 SNORA40.18-201ENST00000391200 128 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 JTBP1-201ENST00000441314 247 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 RPS26P45-201ENST00000471748 340 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 HMGN1P12-201ENST00000499125 195 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 AC105029.1-201ENST00000520250 669 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 MIR1244-1-201ENST00000612829 85 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 MIR6845-201ENST00000613182 61 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 MIR1244-3-201ENST00000635744 85 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 MIR1244-2-201ENST00000636449 85 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 MIR1244-4-202ENST00000636813 85 ntBASIC1.62□□□□□ -2.15
CCDC188H7C350 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC188H7C350 RNU6-281P-201ENST00000384212 103 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CCDC188H7C350 RPL23AP36-201ENST00000413895 458 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 PDCL2P1-201ENST00000419302 352 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 MIR2053-201ENST00000459295 91 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 RPS27P22-201ENST00000478056 241 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 AC023790.1-201ENST00000482174 347 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 RPL17P19-201ENST00000489069 552 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 AC116353.2-201ENST00000505332 712 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 RNU6-1053P-201ENST00000515930 101 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 AC091144.1-201ENST00000519573 138 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 MIR5701-3-201ENST00000578890 82 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 MIR5701-1-201ENST00000585138 82 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 AP001485.1-201ENST00000604799 199 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 MIR5701-2-201ENST00000615634 82 ntBASIC1.61□□□□□ -2.15
CCDC188H7C350 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC188H7C350 Y_RNA.226-201ENST00000364337 114 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 SNORD81.2-201ENST00000365153 76 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 RNU6-950P-201ENST00000384651 107 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 RPL26P26-201ENST00000480251 434 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 AL163195.1-201ENST00000496941 348 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 AC108729.3-201ENST00000513484 108 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 AP003033.1-201ENST00000527244 415 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 AC125232.2-201ENST00000592457 143 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 AC133104.2-201ENST00000615272 193 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 AC104260.1-201ENST00000616660 539 ntBASIC1.6□□□□□ -2.15
CCDC188H7C350 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC188H7C350 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC188H7C350 RNA5SP361-201ENST00000362686 118 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 Y_RNA.164-201ENST00000363709 102 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 RNU6-99P-201ENST00000364721 107 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 RNU4-42P-201ENST00000364738 142 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 SNORA4.2-201ENST00000365313 147 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 RNU6-338P-201ENST00000383888 105 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 MIR625-201ENST00000385047 85 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 RNA5SP109-201ENST00000391010 116 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 FGF7P8-201ENST00000402994 292 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 RNU6-1304P-201ENST00000411374 106 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 AC114482.1-201ENST00000418010 247 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 EIF1P2-201ENST00000428233 350 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC188H7C350 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.59□□□□□ -2.15
CCDC188H7C350 RNU6-559P-201ENST00000516151 98 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 Y_RNA.691-201ENST00000516611 103 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 CYCSP23-201ENST00000519781 313 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 AK6P2-201ENST00000549020 471 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 MIR5690-201ENST00000583739 73 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 MIR4438-201ENST00000585271 93 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 AC099654.14-201ENST00000638599 341 ntBASIC1.59□□□□□ -2.15
CCDC188H7C350 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC188H7C350 AC006026.1-201ENST00000444025 1803 ntBASIC1.59□□□□□ -2.16
CCDC188H7C350 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC188H7C350 RNU1-17P-201ENST00000363022 152 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 Y_RNA.557-201ENST00000384680 107 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 AC005002.2-201ENST00000438228 269 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 RPL30P15-201ENST00000457129 321 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 Y_RNA.675-201ENST00000516389 149 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 AC019176.1-201ENST00000518519 225 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 AC023157.2-201ENST00000540596 141 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 MIR3937-201ENST00000580135 106 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC188H7C350 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC188H7C350 AC022306.2-201ENST00000617563 647 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC188H7C350 AC073544.1-201ENST00000600110 1595 ntBASIC1.58□□□□□ -2.16
CCDC188H7C350 MTND5P10-201ENST00000603719 1809 ntBASIC1.57□□□□□ -2.16
CCDC188H7C350 RNU6-874P-201ENST00000362390 105 ntBASIC1.57□□□□□ -2.16
CCDC188H7C350 RNU1-42P-201ENST00000364033 160 ntBASIC1.57□□□□□ -2.16
CCDC188H7C350 RNU6-1264P-201ENST00000383891 107 ntBASIC1.57□□□□□ -2.16
CCDC188H7C350 Y_RNA.498-201ENST00000384460 102 ntBASIC1.57□□□□□ -2.16
CCDC188H7C350 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
CCDC188H7C350 RNU4-14P-201ENST00000410858 122 ntBASIC1.57□□□□□ -2.16
CCDC188H7C350 AC245047.3-201ENST00000429428 127 ntBASIC1.57□□□□□ -2.16
CCDC188H7C350 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms