Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 RNU6-1328P-201ENST00000410938 106 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 AC010154.1-201ENST00000425857 269 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 ARF4P2-201ENST00000430209 526 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 AC006539.3-201ENST00000454258 129 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 ATP5EP1-201ENST00000510257 156 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 RNU6-479P-201ENST00000516348 105 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 RNU7-116P-201ENST00000516940 62 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 AC090616.3-201ENST00000582184 217 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 MIR548AY-201ENST00000617669 107 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 AC091895.1-201ENST00000624494 256 ntBASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UPK3BL1B0FP48 AC092435.3-201ENST00000565538 3654 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 MIR367-201ENST00000362299 68 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 RNA5SP126-201ENST00000365092 109 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 RNU6-1235P-201ENST00000384559 107 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 MIR518C-201ENST00000384822 101 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 MIR569-201ENST00000385228 96 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 Y_RNA.586-201ENST00000391146 98 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 SNORA36B-201ENST00000410438 131 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 AL353705.1-201ENST00000433468 480 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 AL161788.1-201ENST00000441805 169 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 RNU6-498P-201ENST00000459468 107 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 RPS26P55-201ENST00000471178 356 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 AC006483.1-201ENST00000487308 313 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 AC117454.1-201ENST00000491120 168 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 RNU2-34P-201ENST00000516534 121 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 RNU6-1007P-201ENST00000516586 107 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 AC005972.2-201ENST00000604690 348 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 AL449363.1-201ENST00000617815 186 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 AC068647.2-201ENST00000637380 353 ntBASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
UPK3BL1B0FP48 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 Y_RNA.229-201ENST00000364347 113 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 RNU6-438P-201ENST00000365561 103 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 RNU6-546P-201ENST00000383991 107 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 RNU6-22P-201ENST00000384355 107 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 AL138878.1-201ENST00000405131 347 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 RNU2-51P-201ENST00000410708 197 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 CST9LP2-201ENST00000437612 320 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 AC009969.1-201ENST00000438726 172 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 AC245047.8-201ENST00000456455 284 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 RN7SL330P-201ENST00000469709 307 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 SNORA48.11-201ENST00000517015 89 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 MIR3162-201ENST00000581818 82 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 MIR3945-201ENST00000581853 98 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 AL356280.1-201ENST00000603614 379 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.25□□□□□ -1.89
UPK3BL1B0FP48 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 RNU6-728P-201ENST00000365375 104 ntBASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 SNORD14D-201ENST00000384390 87 ntBASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 RNU6-57P-201ENST00000411348 103 ntBASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 AC008134.1-201ENST00000420943 193 ntBASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 RNA5SP20-201ENST00000515976 84 ntBASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 AC025647.1-201ENST00000517879 253 ntBASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 MIR2682-201ENST00000580305 110 ntBASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 POLR3GP1-201ENST00000594073 261 ntBASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 RMST_8.1-201ENST00000610287 165 ntBASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 U7.8-201ENST00000619968 63 ntBASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPK3BL1B0FP48 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 MIR95-201ENST00000385072 81 ntBASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 AL606845.1-201ENST00000404881 255 ntBASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 AC025750.2-201ENST00000442609 450 ntBASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 AL121914.1-201ENST00000450188 156 ntBASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 EEF1B2P7-201ENST00000451177 676 ntBASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 RN7SL863P-201ENST00000462370 296 ntBASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 RNU6-426P-201ENST00000516464 97 ntBASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 AC127455.1-201ENST00000565496 145 ntBASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPK3BL1B0FP48 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 RNU6-674P-201ENST00000363831 107 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 RNU6-818P-201ENST00000364837 108 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 SNORD116-13-201ENST00000384408 92 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 RNU6-417P-201ENST00000384712 107 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 MT-TT-201ENST00000387460 66 ntBASIC3.22□□□□□ -1.89
UPK3BL1B0FP48 MIR513C-201ENST00000401352 84 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms