Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL590240.4-201ENST00000616908 390 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 7SK.10-201ENST00000621414 298 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 AC127459.3-201ENST00000624328 466 ntBASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TCRBV7S3A2A0A539 RNA5SP160-201ENST00000364866 120 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.361-201ENST00000365515 120 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.446-201ENST00000384178 104 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-196P-201ENST00000384315 107 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.518-201ENST00000384552 113 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 AC139712.2-201ENST00000424302 339 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 RNU7-110P-201ENST00000516891 62 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 MIR3126-201ENST00000577443 74 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 MIR4503-201ENST00000582187 83 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 AL049779.4-201ENST00000604500 156 ntBASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TCRBV7S3A2A0A539 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.84-201ENST00000363011 104 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 SNORD81.1-201ENST00000363064 77 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-1164P-201ENST00000364428 107 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.376-201ENST00000365638 108 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-472P-201ENST00000384299 107 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-160P-201ENST00000384591 107 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 MIR29C-201ENST00000385231 88 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 NDUFB4P4-201ENST00000404822 243 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-57P-201ENST00000411348 103 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 AC008134.1-201ENST00000420943 193 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 SUMO1P2-201ENST00000452524 304 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 HSPE1P25-201ENST00000455484 251 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-966P-201ENST00000516479 104 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 AC008749.1-201ENST00000597650 306 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 U6.115-201ENST00000636045 103 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 FO624990.1-201ENST00000636373 85 ntBASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV7S3A2A0A539 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 SNORD114-7-201ENST00000362520 77 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 RNU4-90P-201ENST00000362773 141 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 SNORD114-6-201ENST00000364393 72 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.331-201ENST00000365267 102 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.452-201ENST00000384202 108 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-21P-201ENST00000384710 107 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 MIR215-201ENST00000384858 110 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 RNU4-30P-201ENST00000410245 143 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-1203P-201ENST00000410703 110 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 AC096920.1-201ENST00000423991 241 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 AL353689.1-201ENST00000438895 199 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 IPO7P1-201ENST00000442031 636 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 AL021397.1-201ENST00000451806 248 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 HMGB3P17-201ENST00000504195 649 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 AC006380.1-201ENST00000603598 186 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 AC013412.1-201ENST00000610687 192 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 AC022202.1-201ENST00000613515 211 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 U4.1-201ENST00000620349 87 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 U6.104-201ENST00000637979 90 ntBASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TCRBV7S3A2A0A539 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 SNORD115-30-201ENST00000364117 82 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 RNU1-91P-201ENST00000364746 163 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 Y_RNA.286-201ENST00000364813 102 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-102P-201ENST00000384485 104 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 MT-TW-201ENST00000387382 68 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 SNORA40.19-201ENST00000390846 128 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 MIR1302-6-201ENST00000408466 90 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 AC016909.1-201ENST00000415916 166 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 AC074050.1-201ENST00000563247 211 ntBASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.16□□□□□ -2.06
TCRBV7S3A2A0A539 RNU6-1240P-201ENST00000365155 104 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-290P-201ENST00000365212 101 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.541-201ENST00000384640 113 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U3.40-201ENST00000408706 208 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.602-201ENST00000410535 92 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 AC007064.1-201ENST00000412238 351 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 SNORD65B-201ENST00000459126 73 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 TRBVB-201ENST00000477100 408 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 AC010598.1-201ENST00000510378 103 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-436P-201ENST00000516171 114 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.668-201ENST00000516233 93 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-155P-201ENST00000516347 100 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 SUMO2P18-201ENST00000518873 252 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 AC004817.2-201ENST00000561794 651 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms