Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.94□□□□□ -1.78
DNMT3AQ9Y6K1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.94□□□□□ -1.78
DNMT3AQ9Y6K1 AC091564.4-201ENST00000533934 2194 ntBASIC3.94□□□□□ -1.78
DNMT3AQ9Y6K1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.94□□□□□ -1.78
DNMT3AQ9Y6K1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.94□□□□□ -1.78
DNMT3AQ9Y6K1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
DNMT3AQ9Y6K1 AP003122.5-201ENST00000527668 3766 ntBASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 MIR372-201ENST00000362225 67 ntBASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 RNU6-1305P-201ENST00000364353 104 ntBASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 MIR300-201ENST00000401138 83 ntBASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 MIR1183-201ENST00000408856 89 ntBASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 RBMY2UP-201ENST00000453474 324 ntBASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 RNU6-240P-201ENST00000516098 97 ntBASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 SNORD77.4-201ENST00000516158 81 ntBASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 MIR3129-201ENST00000581095 76 ntBASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.93□□□□□ -1.78
DNMT3AQ9Y6K1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 Y_RNA.4-201ENST00000362333 112 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 RNU6-1099P-201ENST00000363533 107 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 RNU6-674P-201ENST00000363831 107 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 RNA5SP283-201ENST00000365604 119 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 MIR548D2-201ENST00000384955 97 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 MIR591-201ENST00000385290 95 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 SNORA57.1-201ENST00000391227 145 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 MIR1294-201ENST00000408503 142 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 RNU4-37P-201ENST00000410214 84 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 Y_RNA.601-201ENST00000410500 113 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 Y_RNA.620-201ENST00000411009 88 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 AC004941.2-201ENST00000427009 228 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 RNU6-1337P-201ENST00000516525 95 ntBASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.92□□□□□ -1.78
DNMT3AQ9Y6K1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 Y_RNA.316-201ENST00000365118 111 ntBASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 RPL23AP7-203ENST00000449021 469 ntBASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 RPS26P15-201ENST00000488067 348 ntBASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 YPEL5P3-201ENST00000547227 352 ntBASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
DNMT3AQ9Y6K1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
DNMT3AQ9Y6K1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
DNMT3AQ9Y6K1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.9□□□□□ -1.78
DNMT3AQ9Y6K1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
DNMT3AQ9Y6K1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
DNMT3AQ9Y6K1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 Y_RNA.10-201ENST00000362371 110 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 RNU6-170P-201ENST00000362832 104 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 RNU6-938P-201ENST00000411285 103 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 AC083863.1-201ENST00000438811 231 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 RPL36AP21-201ENST00000490372 323 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 AC025554.1-201ENST00000505641 188 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 SNORA70.14-201ENST00000516205 110 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 RNU6-1098P-201ENST00000516772 96 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 RN7SKP209-201ENST00000516888 304 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 RNA5SP179-201ENST00000517284 121 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 MIR4668-201ENST00000582284 70 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 AL606490.9-201ENST00000603331 271 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 AC091167.4-201ENST00000605079 184 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 AC093732.2-201ENST00000607950 274 ntBASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
DNMT3AQ9Y6K1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 AL356292.1-201ENST00000283110 373 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 RNA5SP399-201ENST00000364003 117 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 SNORA51.4-201ENST00000364993 124 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 SNORA1-201ENST00000384107 130 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 RNU6-409P-201ENST00000384114 104 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 MIR759-201ENST00000390224 91 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 RNU6-816P-201ENST00000390914 107 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 RNU6-1268P-201ENST00000391214 107 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 RNU6-1239P-201ENST00000391310 107 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 AL355796.1-201ENST00000406706 323 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 MIR1193-201ENST00000408109 78 ntBASIC3.89□□□□□ -1.79
DNMT3AQ9Y6K1 RPL32P35-201ENST00000415214 394 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms