Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC099778.2-201ENST00000610904 211 ntBASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.16□□□□□ -1.9
HCFC2Q9Y5Z7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.15□□□□□ -1.9
HCFC2Q9Y5Z7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 RNU4-82P-201ENST00000362443 140 ntBASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 RNU6-818P-201ENST00000364837 108 ntBASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 MIR513C-201ENST00000401352 84 ntBASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 RNU6-855P-201ENST00000410395 104 ntBASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 AL109933.2-201ENST00000452651 260 ntBASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 SNORA31.21-201ENST00000517180 77 ntBASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HCFC2Q9Y5Z7 AL136164.4-201ENST00000625013 2135 ntBASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 RNU6-1048P-201ENST00000364054 107 ntBASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 SNORD32B-201ENST00000364460 84 ntBASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 Y_RNA.273-201ENST00000364703 102 ntBASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 RNU6-851P-201ENST00000384565 107 ntBASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 MIR548B-201ENST00000385247 97 ntBASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 RNU6-1228P-201ENST00000391014 107 ntBASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 RNU7-141P-201ENST00000459304 62 ntBASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 AC025754.2-201ENST00000606491 432 ntBASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HCFC2Q9Y5Z7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 AC100821.1-201ENST00000523153 2479 ntBASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 Y_RNA.24-201ENST00000362508 103 ntBASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 RNU6-1205P-201ENST00000363625 106 ntBASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 RNU4-11P-201ENST00000365287 132 ntBASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 MIR539-201ENST00000365690 78 ntBASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 MIR1185-2-201ENST00000408687 86 ntBASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 MTND4LP9-201ENST00000427694 174 ntBASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 AL137159.1-201ENST00000452808 512 ntBASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 SCARNA8-201ENST00000515924 131 ntBASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 MIR3646-201ENST00000578301 84 ntBASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HCFC2Q9Y5Z7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 Y_RNA.127-201ENST00000363386 109 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 RNU4-10P-201ENST00000364383 140 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 RNU6-969P-201ENST00000383900 105 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 RNY3P5-201ENST00000384127 102 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 MIR29B2-201ENST00000385055 81 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 AC063976.3-201ENST00000426849 329 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 AC087499.2-201ENST00000432861 149 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 HSPE1P13-201ENST00000451143 297 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 RPL36AP48-201ENST00000485521 314 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 PWAR6-201ENST00000552334 4618 ntBASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
HCFC2Q9Y5Z7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 AC009487.2-201ENST00000420969 6821 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 Y_RNA.172-201ENST00000363765 102 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 RNU6-643P-201ENST00000384018 107 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 RNU4-43P-201ENST00000410628 137 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 AC112771.1-201ENST00000463581 102 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 RPL36AP21-201ENST00000490372 323 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 RNU6-453P-201ENST00000516819 85 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 HSPE1P18-201ENST00000517602 280 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 AC107016.2-201ENST00000547968 190 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 MIR4724-201ENST00000579485 89 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 AC006111.3-201ENST00000622137 383 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 SNORA50A-202ENST00000629536 136 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 AC009487.4-201ENST00000624969 3585 ntBASIC3.11□□□□□ -1.91
HCFC2Q9Y5Z7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HCFC2Q9Y5Z7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.1□□□□□ -1.91
HCFC2Q9Y5Z7 SNORD116-14-201ENST00000383894 92 ntBASIC3.1□□□□□ -1.91
HCFC2Q9Y5Z7 SNORD116-17-201ENST00000383929 92 ntBASIC3.1□□□□□ -1.91
HCFC2Q9Y5Z7 SNORD116-15-201ENST00000384445 92 ntBASIC3.1□□□□□ -1.91
HCFC2Q9Y5Z7 SNORD116-19-201ENST00000384729 92 ntBASIC3.1□□□□□ -1.91
HCFC2Q9Y5Z7 MIR300-201ENST00000401138 83 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms