Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MIR5588-201ENST00000581890 63 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 AC073413.2-201ENST00000604332 360 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 AC022217.4-201ENST00000604389 163 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 AC012531.4-201ENST00000616509 177 ntBASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB3Q9Y5E6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 ZNF962P-201ENST00000443465 3140 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 Y_RNA.313-201ENST00000365095 103 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 AL359837.1-201ENST00000381357 287 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 AL157831.1-201ENST00000426134 473 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 AC025554.1-201ENST00000505641 188 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-795P-201ENST00000516323 103 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 RNA5SP49-201ENST00000516450 115 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 RNU7-6P-201ENST00000516845 62 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 RNU7-70P-201ENST00000516941 66 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 MIR4666B-201ENST00000578142 81 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 MIR4305-201ENST00000583252 102 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 AC087685.1-201ENST00000587507 141 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 MIR92B-201ENST00000607575 96 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 RNA5SP196-201ENST00000625967 102 ntBASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHB3Q9Y5E6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 Y_RNA.531-201ENST00000384589 121 ntBASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 MIR548O-201ENST00000408583 114 ntBASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 RNA5SP306-201ENST00000411087 107 ntBASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 AC025750.2-201ENST00000442609 450 ntBASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 AC233266.1-201ENST00000454518 96 ntBASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 AC113410.1-201ENST00000505029 247 ntBASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 AC242852.1-201ENST00000612151 96 ntBASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 AC244015.1-201ENST00000622301 99 ntBASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHB3Q9Y5E6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 MAPK10-372ENST00000641954 3413 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 RNU1-14P-201ENST00000362759 152 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-170P-201ENST00000362832 104 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 RNU1-133P-201ENST00000364867 167 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 RPL21P3-201ENST00000395517 478 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-402P-201ENST00000410678 103 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 AC073261.1-201ENST00000429409 121 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 RNU1-131P-201ENST00000458943 161 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 AC010401.1-201ENST00000463867 348 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 RNU2-35P-201ENST00000516446 142 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 RNU6-1291P-201ENST00000516591 104 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 AC034105.4-201ENST00000568304 277 ntBASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHB3Q9Y5E6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHB3Q9Y5E6 ZNF271P-202ENST00000465539 1970 ntBASIC4.09□□□□□ -1.76
PCDHB3Q9Y5E6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 Y_RNA.437-201ENST00000384113 113 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 Y_RNA.507-201ENST00000384500 99 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 MIR554-201ENST00000384874 96 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 MIR1183-201ENST00000408856 89 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 RNU6-938P-201ENST00000411285 103 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 AL162151.2-201ENST00000448875 158 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 SNORA84-201ENST00000459229 133 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 RNU7-171P-201ENST00000459581 62 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 SNRPGP3-201ENST00000469405 227 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 AC139453.2-201ENST00000487255 133 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 RAC1P2-201ENST00000511164 579 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 AC019288.1-201ENST00000557918 224 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 MIR4694-201ENST00000578534 80 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 AC103810.1-201ENST00000579873 453 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 AC002076.2-201ENST00000617362 122 ntBASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHB3Q9Y5E6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms